Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   BT137_RS02725 Genome accession   NZ_LT632617
Coordinates   542289..544496 (-) Length   735 a.a.
NCBI ID   WP_038837641.1    Uniprot ID   A0A4T1FFX4
Organism   Legionella pneumophila strain ST42 isolate ST42     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 537289..549496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT137_RS02705 (EUL120_00535) - 537794..539722 (-) 1929 WP_038837655.1 hypothetical protein -
  BT137_RS02710 (EUL120_00536) - 539848..540240 (-) 393 WP_011214843.1 hypothetical protein -
  BT137_RS02715 (EUL120_00537) - 540377..540754 (+) 378 WP_038837636.1 hypothetical protein -
  BT137_RS02720 (EUL120_00538) - 540956..542263 (+) 1308 WP_038837639.1 tetratricopeptide repeat protein -
  BT137_RS02725 (EUL120_00539) comEC 542289..544496 (-) 2208 WP_038837641.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BT137_RS02730 (EUL120_00540) pilE 544574..545023 (-) 450 WP_010946364.1 type IV pilin protein Machinery gene
  BT137_RS02735 (EUL120_00541) - 545035..548544 (-) 3510 WP_050566909.1 pilus assembly protein -
  BT137_RS02740 (EUL120_00542) - 548557..549069 (-) 513 WP_038837643.1 pilus assembly protein -

Sequence

Protein


Download         Length: 735 a.a.        Molecular weight: 83196.74 Da        Isoelectric Point: 9.6732

>NTDB_id=1145601 BT137_RS02725 WP_038837641.1 542289..544496(-) (comEC) [Legionella pneumophila strain ST42 isolate ST42]
MEIFCFLIGVLYAYTYNIYLTIAIPLLFYITPRYPIVLFFIAGCGFALIHQWIVSPKGMPDTQVITQAQLEGTIASIPMQ
RPNKTQFHFAIEKINNNPAQGLIQLNWYNKPPVLRAGQRWQLSVKLKKPRNFHNPGGFNYVSYLGARHIHWTGYIRYGNN
KLISNQPPSFSWLTLREKIGDALTKMAPNTETAGIIEALTLNVTHHISSDHWNLFRRTGTIHLFGISGEHIALVSGIFFI
VMRWIWSINYRCCLFLPANTIASIGGLLAALPYSFLAGFEPPVQRALIGCVLYTIYAIGKQRFTPWQIWRYALFLVLCIE
PHAVFLQGFYFSFLAVACLLLTHQRWPLKNYKKTLALQLSCLIGLMPLTLHWYSYGSINGFLANLFAIPLVSFLIVPLAL
MTMITSPFHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPL
FPPRTAIYPGEALINILDVGQGLAVAIQTQHHVLLYDTGDSYFQGSDLGQMAIIPFFRSIGIKTIDKIVISHPDKDHKGG
LNSLEKEMQVNQLIVNDPYFYKRGSNCHSYPQWQWDGVSFRFLPIRESFNKKNNNSCILQVSNSAGRVLLTGDIEKAAEE
YLVRNYGSQLASEILVVPHHGSKTSSSYRFLLEVSPLYAIASLGFDNRFKFPHSKTLQSMKTLGITFFRTDECGMAEIKL
PASGKINKPTCMQAE

Nucleotide


Download         Length: 2208 bp        

>NTDB_id=1145601 BT137_RS02725 WP_038837641.1 542289..544496(-) (comEC) [Legionella pneumophila strain ST42 isolate ST42]
ATGGAAATTTTTTGCTTTTTAATAGGCGTACTTTATGCCTATACCTATAATATTTATCTAACTATTGCGATTCCTTTACT
CTTTTATATCACCCCAAGGTATCCGATTGTCCTGTTCTTCATCGCCGGGTGCGGCTTTGCCCTGATTCATCAGTGGATTG
TATCTCCCAAGGGCATGCCTGATACGCAAGTAATCACTCAAGCCCAATTGGAAGGAACTATTGCGTCCATCCCCATGCAA
CGTCCTAACAAAACCCAATTCCATTTTGCAATTGAAAAAATTAATAATAACCCTGCTCAAGGCTTGATCCAATTAAACTG
GTATAACAAACCACCTGTCTTACGAGCCGGTCAGCGATGGCAACTTTCAGTGAAACTAAAAAAACCTCGTAACTTCCACA
ACCCGGGAGGTTTTAATTATGTAAGTTACCTGGGGGCTCGTCATATCCATTGGACTGGCTATATTCGTTATGGGAATAAT
AAGCTAATTAGCAATCAACCCCCTTCTTTCAGTTGGTTAACACTACGTGAAAAAATTGGGGATGCTTTGACAAAAATGGC
ACCGAATACAGAAACGGCAGGCATCATCGAAGCATTGACGTTAAATGTTACTCACCATATCAGTTCAGATCATTGGAATT
TGTTCCGAAGAACAGGAACGATACATTTATTCGGCATTTCAGGAGAACACATCGCTCTGGTCTCCGGCATTTTCTTTATC
GTGATGAGATGGATTTGGTCAATAAATTATCGATGCTGTTTGTTCTTACCGGCCAATACCATAGCGAGTATCGGTGGGCT
ACTGGCCGCCTTGCCCTATTCTTTTTTAGCCGGGTTTGAGCCTCCTGTGCAACGTGCTTTAATTGGTTGTGTACTTTACA
CAATATACGCCATAGGAAAACAACGTTTTACACCATGGCAAATATGGAGATATGCCTTATTTTTAGTCTTGTGTATTGAG
CCCCATGCCGTATTCCTGCAAGGTTTTTACTTTTCATTTCTTGCCGTGGCCTGTCTTCTATTGACTCATCAACGCTGGCC
ACTGAAAAATTATAAAAAAACACTGGCATTACAATTAAGCTGCCTCATTGGATTAATGCCCTTGACTCTCCATTGGTACT
CCTATGGTTCTATCAATGGATTTCTTGCCAATTTATTCGCCATACCTTTAGTCAGTTTTCTGATAGTGCCCTTGGCTTTA
ATGACTATGATAACGAGTCCATTTCATTGGTCCTGGATATTGATGAAACCATTGGCGTGGCTTGTTGCCCTGTTACTGCA
AGGACTAACGTATGTTGAGCAAATAGCTGGGATCAATATCACCTGGTCCATCACCTCGGTAACAATGATGCTCGCTATGA
CAGCAGGTCTGTTTTTAAGGGTATTATTACCCGTCAAGCCATTCAAACACTTGGCTATCCTTTGGATTATCCTTCCCTTA
TTTCCGCCTCGTACTGCAATTTATCCAGGGGAAGCATTAATTAATATTTTGGATGTTGGGCAAGGACTTGCCGTTGCGAT
ACAAACGCAACATCATGTTTTACTCTACGATACGGGAGATTCCTATTTTCAGGGAAGTGATTTAGGGCAAATGGCGATAA
TCCCCTTTTTCAGGTCAATTGGAATAAAAACAATTGACAAAATAGTAATAAGCCATCCCGATAAAGATCATAAAGGCGGA
TTAAATTCCCTTGAAAAAGAGATGCAAGTTAATCAACTAATAGTGAATGATCCCTATTTTTATAAACGTGGAAGTAATTG
TCATTCATACCCGCAATGGCAATGGGATGGGGTGAGTTTTCGTTTTTTACCCATCAGGGAATCTTTCAATAAAAAAAATA
ATAATTCTTGTATCTTGCAGGTAAGTAATTCGGCTGGCAGGGTTTTATTAACGGGAGATATTGAAAAAGCAGCGGAGGAG
TACCTGGTAAGAAACTACGGCAGTCAGCTGGCATCAGAAATTTTAGTTGTGCCTCATCATGGGAGCAAAACGTCTTCATC
CTATCGATTTTTGCTGGAAGTAAGTCCGCTTTATGCCATTGCATCTTTAGGATTTGATAATCGCTTCAAATTTCCACATT
CTAAAACTTTGCAAAGCATGAAAACATTAGGTATCACTTTTTTTAGAACAGACGAATGCGGAATGGCAGAAATCAAACTA
CCTGCGTCAGGTAAAATTAACAAACCAACCTGTATGCAGGCTGAATAA

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(21-158)

Metallo-beta-lactamase superfamily (Lactamase_B)

(498-578)

Competence protein (Competence)

(199-464)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4T1FFX4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Legionella pneumophila strain Lp02

98.501

99.864

0.984
  comEC Legionella pneumophila strain ERS1305867

96.599

100

0.966

Multiple sequence alignment