Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilE   Type   Machinery gene
Locus tag   BT141_RS03495 Genome accession   NZ_LT632614
Coordinates   720889..721338 (-) Length   149 a.a.
NCBI ID   WP_010946364.1    Uniprot ID   Q5ZXV4
Organism   Legionella pneumophila strain ST62 isolate ST62     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 715889..726338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT141_RS03475 (H044120014_00677) - 716163..716555 (-) 393 WP_010946360.1 hypothetical protein -
  BT141_RS03480 (H044120014_00678) - 716692..717069 (+) 378 WP_014841112.1 hypothetical protein -
  BT141_RS03485 (H044120014_00679) - 717271..718578 (+) 1308 WP_014841113.1 tetratricopeptide repeat protein -
  BT141_RS03490 (H044120014_00680) comEC 718604..720811 (-) 2208 WP_014841114.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BT141_RS03495 (H044120014_00681) pilE 720889..721338 (-) 450 WP_010946364.1 type IV pilin protein Machinery gene
  BT141_RS03500 (H044120014_00682) - 721350..724859 (-) 3510 WP_014841115.1 pilus assembly protein -
  BT141_RS03505 (H044120014_00683) - 724872..725384 (-) 513 WP_014841116.1 pilus assembly protein -

Sequence


Protein


Download         Length: 149 a.a.        Molecular weight: 16296.57 Da        Isoelectric Point: 7.6922

>NTDB_id=1145479 BT141_RS03495 WP_010946364.1 720889..721338(-) (pilE) [Legionella pneumophila strain ST62 isolate ST62]
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQDQIILERCYSQNFSYAAACGA
LPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTECASMSINQANVKTAVDSSANAQPECWNPG

Nucleotide


Download         Length: 450 bp        

>NTDB_id=1145479 BT141_RS03495 WP_010946364.1 720889..721338(-) (pilE) [Legionella pneumophila strain ST62 isolate ST62]
ATGCTCAGTCATGTACATTTTATGAAGAATAGCCGTATGAAACAATCCGCGTTTACCCTGGTTGAAGTTCTGATCAGCAT
GGTCATTATGGGAATTCTGGTTTCAATTGCCTATCCATCCTATTTACAATATATACAAAAATCCCGTCGTGCTGATGCTC
ATGCCACATTGACACAAGATCAAATCATTTTAGAACGCTGTTATTCACAGAATTTTTCCTATGCGGCAGCGTGTGGCGCC
CTACCAGCATTTCCTCAAACAACGCCGAATGGGTATTATACTATCAATATTTCAAACCTGACAGCCACAACGTATACCTT
AACCGCAACCCCTGTCGGAACCCAAGCCAAAGATACCGAGTGTGCCAGCATGTCAATTAATCAAGCCAATGTAAAAACAG
CCGTAGATTCCTCCGCTAATGCGCAACCAGAATGCTGGAATCCCGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZXV4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Legionella pneumophila str. Paris

100

100

1

  pilE Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment