Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STACADC2_RS05265 Genome accession   NZ_LT604076
Coordinates   980101..980913 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain ACA-DC     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 975101..985913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STACADC2_RS05240 (STACADC2_0984) - 976037..976423 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  STACADC2_RS05245 (STACADC2_0985) - 976481..977395 (-) 915 Protein_952 GNAT family N-acetyltransferase -
  STACADC2_RS05250 (STACADC2_0986) yidA 977603..978412 (+) 810 WP_011226081.1 sugar-phosphatase -
  STACADC2_RS05255 (STACADC2_0987) - 978414..979628 (+) 1215 WP_087009967.1 aminoacyltransferase -
  STACADC2_RS05260 (STACADC2_0988) - 979680..980041 (-) 362 Protein_955 YbaN family protein -
  STACADC2_RS05265 (STACADC2_0989) vicX 980101..980913 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  STACADC2_RS05270 (STACADC2_0990) vicK 980919..982259 (-) 1341 WP_011227273.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STACADC2_RS05275 (STACADC2_0991) vicR 982252..982959 (-) 708 WP_011227274.1 response regulator YycF Regulator
  STACADC2_RS05280 (STACADC2_0992) - 983485..984252 (+) 768 WP_011227275.1 amino acid ABC transporter ATP-binding protein -
  STACADC2_RS05285 (STACADC2_0993) - 984264..985097 (+) 834 WP_087009968.1 transporter substrate-binding domain-containing protein -
  STACADC2_RS05290 (STACADC2_0994) - 985115..985813 (+) 699 WP_087009969.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=1145087 STACADC2_RS05265 WP_011681204.1 980101..980913(-) (vicX) [Streptococcus thermophilus strain ACA-DC]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1145087 STACADC2_RS05265 WP_011681204.1 980101..980913(-) (vicX) [Streptococcus thermophilus strain ACA-DC]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGTGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774

Multiple sequence alignment