Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLA12_RS11770 Genome accession   NZ_LT599049
Coordinates   2394048..2395334 (-) Length   428 a.a.
NCBI ID   WP_021721862.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain A12     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2389048..2400334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLA12_RS11755 (LLA12_02492) - 2390239..2390775 (-) 537 WP_021721865.1 hypothetical protein -
  LLA12_RS11760 (LLA12_02493) - 2390781..2392112 (-) 1332 WP_021721864.1 FAD/NAD(P)-binding oxidoreductase -
  LLA12_RS11765 (LLA12_02494) - 2392128..2393978 (-) 1851 WP_021721863.1 proline--tRNA ligase -
  LLA12_RS11770 (LLA12_02495) eeP 2394048..2395334 (-) 1287 WP_021721862.1 RIP metalloprotease RseP Regulator
  LLA12_RS11775 (LLA12_02496) - 2395353..2396156 (-) 804 WP_021721861.1 phosphatidate cytidylyltransferase -
  LLA12_RS11780 (LLA12_02497) - 2396156..2396890 (-) 735 WP_003130589.1 isoprenyl transferase -
  LLA12_RS11785 (LLA12_02498) yajC 2397262..2397594 (-) 333 WP_021721860.1 preprotein translocase subunit YajC -
  LLA12_RS11790 (LLA12_02500) - 2397689..2398387 (-) 699 WP_021721859.1 DNA alkylation repair protein -
  LLA12_RS11795 (LLA12_02501) rlmH 2398406..2398885 (-) 480 WP_021721858.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46499.09 Da        Isoelectric Point: 6.7740

>NTDB_id=1144893 LLA12_RS11770 WP_021721862.1 2394048..2395334(-) (eeP) [Lactococcus lactis subsp. lactis strain A12]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSKILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVINPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSASVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1144893 LLA12_RS11770 WP_021721862.1 2394048..2395334(-) (eeP) [Lactococcus lactis subsp. lactis strain A12]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGTCATCTTTGGTGGGC
AAAACGTTCAAAAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCGCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAATAAATCCAGAAGCTGAAAATTCTGTTAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACGGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCAGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGCTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGTCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCGACTGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
CAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57


Multiple sequence alignment