Detailed information NTG0114432

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJH_RS05680
• Genome accession: NZ_CP006851
• Coordinates: 1086366..1087316 (+)
• Length: 316 a.a.
• NCBI ID: WP_041160151.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni F38011
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1081366..1092316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJH_RS05665 (CJH_05725)	-	1082222..1084144 (-)	1923	WP_041160149.1	hypothetical protein	-
CJH_RS05670 (CJH_05730)	-	1084220..1085494 (+)	1275	WP_041160150.1	DUF2972 domain-containing protein	-
CJH_RS05675 (CJH_05735)	-	1085458..1086307 (-)	850	Protein_1093	glycosyltransferase family 2 protein	-
CJH_RS05680 (CJH_05740)	waaF	1086366..1087316 (+)	951	WP_041160151.1	lipopolysaccharide heptosyltransferase II	Regulator
CJH_RS05685 (CJH_05745)	-	1087302..1088066 (-)	765	WP_002899462.1	glycosyltransferase family 25 protein	-
CJH_RS05690 (CJH_05750)	gmhA	1088066..1088626 (-)	561	WP_041160152.1	D-sedoheptulose 7-phosphate isomerase	-
CJH_RS05695 (CJH_05755)	rfaE1	1088623..1090008 (-)	1386	WP_002868598.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJH_RS05700 (CJH_05760)	rfaD	1090001..1090954 (-)	954	WP_002868597.1	ADP-glyceromanno-heptose 6-epimerase	-
CJH_RS05705 (CJH_05765)	gmhB	1090955..1091516 (-)	562	Protein_1099	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJH_RS05710 (CJH_05770)	-	1091597..1091899 (+)	303	WP_002852762.1	cytochrome c	-
CJH_RS05715 (CJH_05775)	ccoS	1091922..1092128 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36292.91 Da
• Isoelectric Point: 10.2419

>NTDB_id=114432 CJH_RS05680 WP_041160151.1 1086366..1087316(+) (waaF) [Campylobacter jejuni subsp. jejuni F38011]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKIKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=114432 CJH_RS05680 WP_041160151.1 1086366..1087316(+) (waaF) [Campylobacter jejuni subsp. jejuni F38011]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCATATAAGTGCGGTCTATAAGATAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.541	99.367	0.949