Detailed information NTG1144279

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: WHOZ_RS11285
• Genome accession: NZ_LT592146
• Coordinates: 1901570..1904674 (-)
• Length: 1034 a.a.
• NCBI ID: WP_115304474.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO O
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1896570..1909674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHOZ_RS11260 (WHOO_02093)	yccS	1897856..1900006 (+)	2151	WP_003699137.1	YccS family putative transporter	-
WHOZ_RS11270 (WHOO_02094C)	-	1900632..1900916 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
WHOZ_RS11285 (WHOO_02095C)	pilC	1901570..1904674 (-)	3105	WP_115304474.1	PilC family type IV pilus tip adhesin	Machinery gene
WHOZ_RS11295 (WHOO_02096)	-	1905363..1905626 (+)	264	WP_017147189.1	hypothetical protein	-
WHOZ_RS11300 (WHOO_02097)	gnd	1905706..1907154 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
WHOZ_RS11305 (WHOO_02098)	waaA	1907217..1908488 (+)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
WHOZ_RS11310 (WHOO_02099)	-	1908529..1908978 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1034 a.a.
• Molecular weight: 112560.82 Da
• Isoelectric Point: 9.8074

>NTDB_id=1144279 WHOZ_RS11285 WP_115304474.1 1901570..1904674(-) (pilC) [Neisseria gonorrhoeae strain WHO O]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGGGAMAQTREYAIIMNGRNQPEVKSSVPYPIKDKDRKRKYTHQNTRGGGGS
VSFDNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKERANAVDWIRTTRIALAGYSYADVVCRSITGCPKLVYKTR
FSFDNPDLLKTRGGLDRYTESSRENSPIYKLKDHPWLGVSFNLSSENTVKDGRLSNKLISSFSEGNNNQTIVSTTEDRPI
SLGDSQREHTAVAYYLNAKLHLLDKKQIKDIAQGKTVRLGVLKPSIDVRQGNTGLVGLLGFHATWDIKDTGQIPVKLGLP
QVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLKPLRE
NEIKSKEPRFNGRQTVIRLDSGVQLIKLNGSKDEVVIFGNTGNNGTFGIVKEANVNFDADEWKKVLLPWTVRGPGNDDKF
KSINREPGKYSQRYRIRDNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRQYFDN
DTSALKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRQVNLNGQDRVFMFGAMGLGGRGAYALDLSKTNGNYPAAAPLFDV
KNGDKNGKNRVEVELGYTVGTPQIGKTQNGKYAAFLASGYAAKDIGSGDNTTALYVYDLENGSGSLIKKIEAPDGKGGLS
SPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFEGRKPITSAPAVSRLADKRVVIFGTGSDLSEEDVVD
TKEQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKESDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTI
RKYNDGGCGAETAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVN
VRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3105 bp

>NTDB_id=1144279 WHOZ_RS11285 WP_115304474.1 1901570..1904674(-) (pilC) [Neisseria gonorrhoeae strain WHO O]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGGGGGCGATGGCGCAAACCCGTGAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGT
CGAGTGTGCCATATCCAATAAAGGACAAAGACAGGAAGCGCAAATATACTCATCAGAACACACGAGGAGGAGGAGGCTCT
GTCTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACGACCCGCA
TCGCGCTGGCAGGCTACAGCTACGCCGATGTCGTATGCAGAAGCATCACAGGCTGTCCCAAACTTGTCTATAAAACCCGA
TTTTCCTTCGATAATCCCGACTTGCTAAAAACAAGAGGCGGGCTGGATAGGTACACAGAGTCAAGCCGCGAAAATTCGCC
CATTTACAAATTGAAAGATCATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATGGCAGAT
TATCCAACAAATTGATATCTTCTTTTAGTGAAGGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCGCCCTATT
TCCCTTGGCGACTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAACA
GATTAAAGATATCGCCCAAGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGCAAGGAAATACGG
GGCTTGTCGGCTTGCTAGGTTTTCATGCTACGTGGGACATTAAAGATACCGGGCAGATCCCGGTCAAGCTCGGCCTGCCG
CAAGTCAAAGCCGGGCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGC
GCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCA
GCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGGGAG
AATGAGATTAAAAGTAAAGAGCCGCGTTTCAACGGAAGGCAGACCGTCATCCGATTGGATAGCGGCGTACAGCTGATCAA
ACTGAATGGAAGCAAGGATGAGGTCGTCATTTTTGGAAACACCGGCAACAACGGCACTTTCGGCATTGTTAAGGAAGCGA
ACGTCAATTTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGGTAATGACGATAAATTT
AAATCAATTAACCGAGAACCAGGCAAATACAGCCAAAGATACCGCATCCGCGACAACGGCAATCGCGATTTGGGCGACAT
CGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCCAACGACGGGATGGTGCATATCTTCAAAAAAA
ACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAAC
GACACTTCCGCTCTCAAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTA
CGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTAACTTAAACGGACAAGACCGCGTGTTTATGTTCGGCGCGATGGGTT
TGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGCTCCCCTGTTTGATGTC
AAAAATGGCGATAAGAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAAC
CCAAAACGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAAGATATTGGCAGCGGCGATAATACAACCGCGC
TGTATGTGTATGATTTGGAAAACGGCAGTGGTAGTCTGATTAAAAAAATCGAAGCACCCGACGGCAAAGGCGGGCTTTCG
TCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGGAATATGTACCG
CTTTGATTTGAGCGACAACGACCCGAACAAATGGTCTGTACGCACTATTTTCGAAGGCAGGAAGCCGATTACCTCCGCGC
CCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGAT
ACGAAAGAACAATATATTTACGGTATCTTCGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGG
CGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGAATCCGACGGATCGGGCAGTAAGG
GGTGGGTAGTGAAATTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATC
CGCAAATATAACGACGGCGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCC
GAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCA
AATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAAT
GTGCGTTACCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCC
CGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACA
GCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (504-844)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.909	100	0.753