Detailed information NTG1144239

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: WHOZ_RS00340
• Genome accession: NZ_LT592146
• Coordinates: 53483..56617 (-)
• Length: 1044 a.a.
• NCBI ID: WP_115304451.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO O
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48483..61617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHOZ_RS00300 (WHOO_00050C)	-	49543..49932 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
WHOZ_RS00305 (WHOO_00051C)	-	50095..50474 (-)	380	Protein_49	VOC family protein	-
WHOZ_RS00310 (WHOO_00052C)	carA	50528..51661 (-)	1134	WP_025456026.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
WHOZ_RS00325 (WHOO_00053C)	-	52376..52660 (-)	285	WP_003701816.1	GIY-YIG nuclease family protein	-
WHOZ_RS00340 (WHOO_00054C)	pilC	53483..56617 (-)	3135	WP_115304451.1	PilC family type IV pilus tip adhesin	Machinery gene
WHOZ_RS00365 (WHOO_00055C)	apbC	59128..60207 (-)	1080	WP_025456543.1	iron-sulfur cluster carrier protein ApbC	-
WHOZ_RS00375 (WHOO_00057)	-	60581..61090 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-

Sequence

Protein

• Length: 1044 a.a.
• Molecular weight: 114250.64 Da
• Isoelectric Point: 9.8525

>NTDB_id=1144239 WHOZ_RS00340 WP_115304451.1 53483..56617(-) (pilC) [Neisseria gonorrhoeae strain WHO O]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGGGAMAQTREYAIIMNGRNQPEVKSSVPYPIKDKDRKRKYTHQNTRGGGGS
VSFDNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKERANAVDWIRTTRIALAGYSYADVVCRSITGCPKLVYKTR
FSFDNPDLLKTRGGLDRYTESSRDNSPIYKLKDYPWLGVSFNLGAEGTAKDGKVTNKLVSSFDENNSNSNQNLVYTTEGH
NISLGNWQREHTAVAYYLNAKLHLLDKKQIKDIAQGKTVRLGVLKPSIDVRQGNTGLAGLLGFHATWDIKDTGQIPVKLG
LPQVKAGRCTNAAHPNPKVKPLSPALTAPALWFDPAQNGKVQMYSASVSTYPGSSSSRIFLQELKTKTDPGRPGRHSLAA
LNERDIKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGFNDNDGKNDTFGIYKDRLVIPEPDEWSEVLLPWTARYYGND
DIFKTFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATAANDGMVHLFKRNGTDQRGYELKL
SYIPGTMPRQYFDNDTSALKDSTLAQELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDL
TKIDNSNLTGVSMFDVKNESKNNGVKLGYTVGTPQIGKTRSGKYAAFLASGYAAKDIGSGDNTTALYVYDLGNTLGTLIA
KIDVPGGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSNSDSSKWSAKVIFEGDKPITSAPAVSRLADKRVVIFG
TGSDLSEQDVLDTKEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTV
KPTVVLRTAFVTIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSVPIGCMWKNGKTVCP
NGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWR
EVFF

Nucleotide

• Length: 3135 bp

>NTDB_id=1144239 WHOZ_RS00340 WP_115304451.1 53483..56617(-) (pilC) [Neisseria gonorrhoeae strain WHO O]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGGGGGCGATGGCGCAAACCCGTGAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGT
CGAGTGTGCCATATCCAATAAAGGACAAAGACAGGAAGCGCAAATATACTCATCAGAACACACGAGGAGGAGGAGGCTCT
GTCTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACGACCCGCA
TCGCGCTGGCAGGCTACAGCTACGCCGATGTCGTATGCAGAAGCATCACAGGCTGTCCCAAACTTGTCTATAAAACCCGA
TTTTCCTTCGATAATCCCGACTTGCTAAAAACAAGAGGCGGGCTGGATAGGTACACAGAGTCAAGCCGCGACAATTCGCC
CATTTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGG
TAACCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACCACGGAAGGCCAC
AATATTTCCTTGGGCAACTGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAA
AAAACAGATTAAAGATATCGCCCAAGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGCAAGGAA
ATACGGGGCTTGCCGGCTTGCTAGGTTTTCATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGC
CTGCCGCAAGTCAAAGCCGGGCGCTGCACCAACGCCGCCCACCCCAATCCCAAGGTCAAACCCCTTTCGCCGGCACTGAC
CGCCCCCGCGCTGTGGTTCGACCCTGCGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCA
GTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGGCATTCCCTCGCCGCT
TTGAATGAACGAGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTA
CCGGATCGCCCCGGGCAATAGCGGCCGGGTCGCGGGTTTTAATGACAATGACGGCAAAAACGACACTTTCGGGATCTACA
AGGACAGGCTCGTCATACCTGAGCCCGACGAGTGGAGCGAAGTGCTGCTGCCTTGGACGGCTCGGTATTACGGTAATGAC
GATATATTTAAAACATTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAAATACCGCATCCG
CACAAAAGAAGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATC
TGGCAACCGCCGCGAACGACGGGATGGTGCACCTGTTTAAAAGAAACGGCACAGACCAACGAGGCTACGAACTGAAGCTC
AGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCAAAGACTCCACCCTCGCCCAAGA
GCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAG
ATGACCAGGACAGGCAAAAACATTTCTTTATGTTTGGTGCGATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTG
ACCAAAATCGACAACAGCAACCTGACCGGCGTTTCCATGTTTGATGTCAAAAACGAGAGTAAAAATAATGGCGTGAAATT
AGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCGCAGCGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGG
CTAAAGATATTGGCAGCGGCGATAATACAACCGCGCTGTATGTGTATGATTTGGGAAACACCTTAGGTACGCTGATTGCA
AAAATCGATGTGCCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATAT
CGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCAATTCCGATTCTAGTAAATGGTCTGCAAAGG
TTATTTTCGAAGGCGACAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGT
ACGGGCAGCGATTTGAGTGAACAGGATGTACTCGATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGC
GGCGAATAATGTAAATGCAAGCCGTGGCGTTTTGGGGAGCGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACAT
TATTCCTGAACAAGAGATCCGACGGTTCGGGCAGCAAGGGCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTC
AAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCAT
TTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGC
AATATTCCGGCCATCAGAAAATGAACGGCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCG
AACGGATATGTTTACGACAAACCGGTTAATGTGCGCTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGA
CGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTG
TGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGC
GAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (519-857)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	69.84	100	0.71