Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | E4V86_RS10160 | Genome accession | NZ_LT591910 |
| Coordinates | 1732804..1733229 (+) | Length | 141 a.a. |
| NCBI ID | WP_134472171.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO N | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1727804..1738229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4V86_RS13405 | - | 1728253..1728645 (+) | 393 | Protein_1750 | pilin | - |
| E4V86_RS14010 | - | 1728685..1729014 (+) | 330 | Protein_1751 | pilin | - |
| E4V86_RS13410 | - | 1729030..1729359 (+) | 330 | Protein_1752 | pilin | - |
| E4V86_RS14470 | - | 1729359..1729610 (+) | 252 | Protein_1753 | pilin | - |
| E4V86_RS14475 | - | 1729668..1729892 (+) | 225 | Protein_1754 | pilin | - |
| E4V86_RS10135 (WHON_01903) | - | 1730024..1730410 (+) | 387 | Protein_1755 | pilin | - |
| E4V86_RS10145 (WHON_01904) | - | 1730875..1731273 (+) | 399 | Protein_1756 | pilin | - |
| E4V86_RS10155 (WHON_01905) | lpxC | 1731775..1732698 (+) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| E4V86_RS10160 (WHON_01906) | pilE | 1732804..1733229 (+) | 426 | WP_134472171.1 | pilin | Machinery gene |
| E4V86_RS14015 | - | 1733367..1733470 (+) | 104 | Protein_1759 | pilin | - |
| E4V86_RS14020 | - | 1734023..1734412 (+) | 390 | Protein_1760 | pilin | - |
| E4V86_RS14025 | - | 1734452..1734778 (+) | 327 | Protein_1761 | pilin | - |
| E4V86_RS13425 | - | 1734797..1735126 (+) | 330 | Protein_1762 | pilin | - |
| E4V86_RS10200 (WHON_01908) | - | 1735258..1735659 (+) | 402 | WP_269472848.1 | pilin | - |
| E4V86_RS10210 (WHON_01909) | - | 1735791..1736177 (+) | 387 | Protein_1764 | pilin | - |
| E4V86_RS14480 | - | 1736587..1736721 (+) | 135 | WP_256344619.1 | hypothetical protein | - |
| E4V86_RS10220 (WHON_01910) | - | 1736706..1737371 (+) | 666 | WP_144894360.1 | opacity family porin | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15086.92 Da Isoelectric Point: 9.1792
>NTDB_id=1144228 E4V86_RS10160 WP_134472171.1 1732804..1733229(+) (pilE) [Neisseria gonorrhoeae strain WHO N]
MPTDPDSRLRGNDEAILLAEGQKSAVTGYCLNHGIWPANNTSAGVASASEIKGKYVQKVEVAKGVVTAQMASTGVNKEIK
NKKLSLWAKRQDGSVKWFCGQPVQRGAANDPKDAVTADTNGNEKINTKHLPSTCRDNFDAS
MPTDPDSRLRGNDEAILLAEGQKSAVTGYCLNHGIWPANNTSAGVASASEIKGKYVQKVEVAKGVVTAQMASTGVNKEIK
NKKLSLWAKRQDGSVKWFCGQPVQRGAANDPKDAVTADTNGNEKINTKHLPSTCRDNFDAS
Nucleotide
Download Length: 426 bp
>NTDB_id=1144228 E4V86_RS10160 WP_134472171.1 1732804..1733229(+) (pilE) [Neisseria gonorrhoeae strain WHO N]
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTTAC
CGGGTATTGCCTGAATCACGGCATATGGCCCGCAAACAACACTTCTGCCGGCGTGGCATCCGCTTCAGAAATCAAAGGCA
AATATGTTCAGAAAGTTGAAGTCGCAAAAGGCGTCGTTACCGCCCAAATGGCTTCAACCGGCGTAAACAAAGAAATCAAA
AACAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTCAGCGCGGCGC
CGCCAACGACCCCAAAGACGCCGTTACCGCCGACACCAACGGCAACGAAAAAATCAACACCAAGCACCTGCCGTCAACCT
GCCGCGATAACTTTGATGCCAGCTGA
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTTAC
CGGGTATTGCCTGAATCACGGCATATGGCCCGCAAACAACACTTCTGCCGGCGTGGCATCCGCTTCAGAAATCAAAGGCA
AATATGTTCAGAAAGTTGAAGTCGCAAAAGGCGTCGTTACCGCCCAAATGGCTTCAACCGGCGTAAACAAAGAAATCAAA
AACAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTCAGCGCGGCGC
CGCCAACGACCCCAAAGACGCCGTTACCGCCGACACCAACGGCAACGAAAAAATCAACACCAAGCACCTGCCGTCAACCT
GCCGCGATAACTTTGATGCCAGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
72.535 |
100 |
0.73 |
| pilE | Neisseria gonorrhoeae MS11 |
63.768 |
97.872 |
0.624 |