Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   C7S00_RS10715 Genome accession   NZ_LT591901
Coordinates   1832709..1833407 (+) Length   232 a.a.
NCBI ID   WP_003689902.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain WHO L     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1827709..1838407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7S00_RS10695 (WHOL_01997C) trpC 1828808..1829590 (-) 783 WP_003694229.1 indole-3-glycerol phosphate synthase TrpC -
  C7S00_RS10700 (WHOL_01998C) - 1829641..1830600 (-) 960 WP_003705245.1 YheT family hydrolase -
  C7S00_RS10705 (WHOL_02000C) murJ 1830733..1832271 (-) 1539 WP_003691906.1 murein biosynthesis integral membrane protein MurJ -
  C7S00_RS10715 (WHOL_02001) dsbA1 1832709..1833407 (+) 699 WP_003689902.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  C7S00_RS10720 (WHOL_02002C) amgK 1833464..1834468 (-) 1005 WP_003689901.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  C7S00_RS10725 (WHOL_02003) - 1834538..1836943 (+) 2406 WP_003691904.1 LPS-assembly protein LptD -
  C7S00_RS10730 (WHOL_02004) - 1837045..1838046 (+) 1002 WP_003691902.1 peptidylprolyl isomerase -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25235.89 Da        Isoelectric Point: 5.6758

>NTDB_id=1144083 C7S00_RS10715 WP_003689902.1 1832709..1833407(+) (dsbA1) [Neisseria gonorrhoeae strain WHO L]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAR
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=1144083 C7S00_RS10715 WP_003689902.1 1832709..1833407(+) (dsbA1) [Neisseria gonorrhoeae strain WHO L]
ATGAAATCCAGACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGACTGGTCGAAGGGCAAAACTACACCGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAGGTTGAAGTGCTTGAGTTTTTCGGCTATTTTTGTCCGCACTGCGCCCGC
CTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCCTACGAATCCCCCGAAAGTCAGGCGCGCGCCGGCAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGTGAAGAACAAAAAGCCGCGCAGTAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

97.845

100

0.978
  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621

Multiple sequence alignment