Detailed information NTG0114398

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SSAL8618_RS10145
• Genome accession: NZ_CP009913
• Coordinates: 2175182..2176282 (+)
• Length: 366 a.a.
• NCBI ID: WP_038676931.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NCTC 8618
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2170182..2181282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSAL8618_RS10120 (SSAL8618_10120)	pgsA	2170724..2171266 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SSAL8618_RS10125 (SSAL8618_10125)	-	2171279..2172136 (-)	858	WP_022496147.1	helix-turn-helix transcriptional regulator	-
SSAL8618_RS10130 (SSAL8618_10130)	yfmH	2172195..2173472 (-)	1278	WP_022496146.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SSAL8618_RS10135 (SSAL8618_10135)	yfmF	2173474..2174724 (-)	1251	WP_038676927.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SSAL8618_RS10140 (SSAL8618_10140)	yaaA	2174802..2175179 (+)	378	WP_038676929.1	S4 domain-containing protein YaaA	-
SSAL8618_RS10145 (SSAL8618_10145)	recF	2175182..2176282 (+)	1101	WP_038676931.1	DNA replication/repair protein RecF	Machinery gene
SSAL8618_RS10150 (SSAL8618_10150)	guaB	2176464..2177945 (-)	1482	WP_013991341.1	IMP dehydrogenase	-
SSAL8618_RS10155 (SSAL8618_10155)	trpS	2178124..2179146 (-)	1023	WP_002883969.1	tryptophan--tRNA ligase	-
SSAL8618_RS10160 (SSAL8618_10160)	-	2179575..2180447 (+)	873	WP_002883963.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42202.25 Da
• Isoelectric Point: 8.4088

>NTDB_id=114398 SSAL8618_RS10145 WP_038676931.1 2175182..2176282(+) (recF) [Streptococcus salivarius strain NCTC 8618]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGARVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGNIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=114398 SSAL8618_RS10145 WP_038676931.1 2175182..2176282(+) (recF) [Streptococcus salivarius strain NCTC 8618]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAATGCCCAAGGAAAAACAAATATTCTTGAGGCCATCTATTTTCTAGCATTGACACGTAGTCATCGGA
CCCGTTCAGATAAAGAACTGATTCAATTTCAACAAAATACTCTCAAACTGAACGGCATCGTGCATCGTCATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTTAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACTGTGGTGCTATTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGCCTGAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCCTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAGC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCACATAGGGATGATTTGACATTTTA
CATCAATGACATGAACGCATCTTTCGGTAGTCAGGGGCAGCAACGTAGCCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAACCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTTAAGAATGGTAATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	44.173	100	0.445