Detailed information NTG1143858

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: BN6763_RS06620
• Genome accession: NZ_LT571449
• Coordinates: 1322409..1323383 (-)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis isolate BPH0662
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1317409..1328383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN6763_RS06585	gcvT	1317927..1319018 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
BN6763_RS06590	-	1319236..1319748 (-)	513	WP_002440040.1	shikimate kinase	-
BN6763_RS06595	-	1319913..1320404 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
BN6763_RS06600	-	1320328..1320621 (-)	294	WP_001831116.1	hypothetical protein	-
BN6763_RS06605	comGD	1320608..1321045 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
BN6763_RS06610	comGC	1321035..1321352 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
BN6763_RS06615	comGB	1321370..1322437 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
BN6763_RS06620	comGA	1322409..1323383 (-)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
BN6763_RS06625	-	1323440..1324063 (-)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
BN6763_RS06630	-	1324063..1324389 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
BN6763_RS06635	-	1324389..1325375 (-)	987	WP_001831113.1	ROK family glucokinase	-
BN6763_RS06640	-	1325375..1325575 (-)	201	WP_001831138.1	YqgQ family protein	-
BN6763_RS06645	-	1325559..1327019 (-)	1461	WP_002484879.1	rhomboid family protein	-
BN6763_RS06650	-	1327020..1327571 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
BN6763_RS06655	rpmG	1327754..1327903 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=1143858 BN6763_RS06620 WP_001831109.1 1322409..1323383(-) (comGA) [Staphylococcus epidermidis isolate BPH0662]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=1143858 BN6763_RS06620 WP_001831109.1 1322409..1323383(-) (comGA) [Staphylococcus epidermidis isolate BPH0662]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701