Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NZAK3_RS08285 Genome accession   NZ_LT009690
Coordinates   1670155..1670841 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain NZAK3     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1665155..1675841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NZAK3_RS08265 rpsT 1666069..1666320 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  NZAK3_RS08270 holA 1666365..1667339 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  NZAK3_RS08275 comEC 1667396..1669597 (-) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NZAK3_RS08280 - 1669602..1670063 (-) 462 WP_000439693.1 ComE operon protein 2 -
  NZAK3_RS08285 comEA 1670155..1670841 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  NZAK3_RS08290 - 1670881..1671597 (-) 717 WP_000084830.1 class I SAM-dependent DNA methyltransferase -
  NZAK3_RS08295 rsfS 1671600..1671953 (-) 354 WP_001088020.1 ribosome silencing factor -
  NZAK3_RS08300 yqeK 1671954..1672538 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  NZAK3_RS08305 nadD 1672528..1673097 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  NZAK3_RS08310 yhbY 1673100..1673390 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  NZAK3_RS08315 aroE 1673394..1674200 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  NZAK3_RS08320 yqeH 1674214..1675314 (-) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=1143582 NZAK3_RS08285 WP_001802022.1 1670155..1670841(-) (comEA) [Staphylococcus aureus strain NZAK3]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1143582 NZAK3_RS08285 WP_001802022.1 1670155..1670841(-) (comEA) [Staphylococcus aureus strain NZAK3]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974

Multiple sequence alignment