Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DYY97_RS07500 Genome accession   NZ_LS991421
Coordinates   1518570..1519811 (-) Length   413 a.a.
NCBI ID   WP_070650426.1    Uniprot ID   -
Organism   Lacticaseibacillus zeae isolate CECT 9104     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1513570..1524811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYY97_RS07495 - 1516816..1518546 (-) 1731 WP_070650425.1 proline--tRNA ligase -
  DYY97_RS07500 eeP 1518570..1519811 (-) 1242 WP_070650426.1 RIP metalloprotease RseP Regulator
  DYY97_RS07505 - 1519828..1520616 (-) 789 WP_010488089.1 phosphatidate cytidylyltransferase -
  DYY97_RS07510 - 1520652..1521404 (-) 753 WP_070650427.1 isoprenyl transferase -
  DYY97_RS07520 frr 1521963..1522520 (-) 558 WP_010488081.1 ribosome recycling factor -
  DYY97_RS07525 pyrH 1522520..1523239 (-) 720 WP_010488080.1 UMP kinase -
  DYY97_RS07530 tsf 1523465..1524346 (-) 882 WP_047106254.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45350.02 Da        Isoelectric Point: 8.0451

>NTDB_id=1143077 DYY97_RS07500 WP_070650426.1 1518570..1519811(-) (eeP) [Lacticaseibacillus zeae isolate CECT 9104]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDDEDDIKPG
TMLSLILNDAGKVVRINASDKTTLEGGMPVQVSRVDLVKDLVIEGYPNGDEATLQSWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFILAILTFIIYGLIFGVQILNTNQVGNVLPDYPAAQAGLKSNARVESIDDKKIHSFTDL
STQVSKHAGKSVMFTVKQDGKTQNIAIKPDKKGKIGVMVPVEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLAGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=1143077 DYY97_RS07500 WP_070650426.1 1518570..1519811(-) (eeP) [Lacticaseibacillus zeae isolate CECT 9104]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTCTACTTTGCAAA
ACGCAGCGGTATTCTGGTGCGTGAATTTTCGATTGGCATGGGGCCTAAGCTGTGGGCGTCGCATAAAAATAATACGACCT
ATACATTGCGCTTGTTGCCACTGGGCGGTTATGTGCGTATGGCAGGCTGGCAGGATGATGAAGATGATATCAAACCAGGC
ACGATGCTGAGCCTGATTTTGAACGATGCCGGTAAAGTTGTCCGCATTAATGCCAGCGACAAAACCACATTAGAAGGTGG
CATGCCGGTTCAGGTCAGTCGCGTCGATTTGGTTAAGGATCTTGTCATCGAAGGTTATCCAAATGGTGATGAAGCGACCT
TGCAGAGCTGGCAAGTTGATCATGACGCCACCATCATCGAAGAAGATGGCACGGAAGTCCAGATTGCGCCGGAAGACGTG
CAATTTCAAAATGCACCGGTTTGGCGGCGGCTCTTGGTCAATTTTGCTGGACCGATGAATAACTTTATTCTCGCTATTTT
GACGTTCATCATTTATGGCCTGATTTTTGGTGTGCAGATTTTAAACACCAATCAAGTCGGAAACGTTCTTCCCGATTATC
CGGCTGCCCAAGCAGGACTTAAATCGAATGCTAGAGTTGAGTCGATTGACGACAAAAAGATCCATTCATTTACGGACCTT
TCAACTCAGGTCAGCAAGCATGCCGGCAAATCAGTCATGTTTACTGTCAAGCAGGATGGCAAAACGCAAAATATTGCGAT
TAAACCGGATAAGAAAGGCAAGATTGGCGTGATGGTGCCCGTTGAGAAGTCACCGGCGCGCGCCTTTACTTATGGGTTTA
CCCAAACATGGGATCTAGCTGTTCGTACTTGGGATGTCTTGAAGTCAATGGTCACTGGTGGATTTTCACTCAATAAGCTC
GCCGGGCCGGTTGGCATTTATACCATGACCAGCCAAAGTGCTAAGGGCGGGCTTGCCGGCTTGCTGTTCTTCATGGGTTA
CCTAAGTCTTGGCTTGGGTATTTCAAACCTACTGCCGATTCCGGTCTTGGACGGCGGGAAAATTCTATTAAACCTAATCG
AAATCATTCGGCGTAAGCCACTCAAACCGGAAACTGAAGGTGTAGTCACGATGATCGGTCTGGGTTTGATGGTCTTGTTG
ATGCTCGCCGTCACGATTAATGACATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(205-268)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.533

100

0.513
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501

Multiple sequence alignment