Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | DQL18_RS02985 | Genome accession | NZ_LS483486 |
| Coordinates | 590720..591241 (+) | Length | 173 a.a. |
| NCBI ID | WP_011272048.1 | Uniprot ID | Q4QNA8 |
| Organism | Haemophilus influenzae strain NCTC12194 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 585720..596241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL18_RS02965 (NCTC12194_00591) | - | 585808..586653 (-) | 846 | WP_011272052.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| DQL18_RS02970 (NCTC12194_00592) | - | 586726..589320 (-) | 2595 | WP_105905476.1 | penicillin-binding protein 1A | - |
| DQL18_RS02975 (NCTC12194_00593) | comA | 589419..590216 (+) | 798 | WP_011272050.1 | pilus assembly protein PilM | Machinery gene |
| DQL18_RS02980 (NCTC12194_00594) | comB | 590217..590723 (+) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| DQL18_RS02985 (NCTC12194_00595) | comC | 590720..591241 (+) | 522 | WP_011272048.1 | competence protein ComC | Machinery gene |
| DQL18_RS02990 (NCTC12194_00596) | comD | 591238..591651 (+) | 414 | WP_011272047.1 | pilus assembly protein PilP | Machinery gene |
| DQL18_RS02995 | pilQ | 591661..592999 (+) | 1339 | Protein_559 | type IV pilus secretin PilQ | - |
| DQL18_RS03000 (NCTC12194_00599) | - | 593012..593698 (+) | 687 | WP_011272045.1 | ComF family protein | - |
| DQL18_RS03005 (NCTC12194_00600) | nfuA | 593774..594370 (+) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| DQL18_RS03010 (NCTC12194_00601) | nudC | 594437..595231 (+) | 795 | WP_005686893.1 | NAD(+) diphosphatase | - |
| DQL18_RS03015 (NCTC12194_00602) | - | 595267..595857 (+) | 591 | WP_005686892.1 | YjaG family protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19994.18 Da Isoelectric Point: 10.0952
>NTDB_id=1142623 DQL18_RS02985 WP_011272048.1 590720..591241(+) (comC) [Haemophilus influenzae strain NCTC12194]
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDNPL
QTEIIFQLDKETK
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDNPL
QTEIIFQLDKETK
Nucleotide
Download Length: 522 bp
>NTDB_id=1142623 DQL18_RS02985 WP_011272048.1 590720..591241(+) (comC) [Haemophilus influenzae strain NCTC12194]
ATGAAAGCTTTTTTTAACGATCCTTTTACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAGTCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCGCGTAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAACCCATTG
CAAACCGAGATCATTTTTCAGCTAGATAAGGAAACAAAATGA
ATGAAAGCTTTTTTTAACGATCCTTTTACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAGTCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCGCGTAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAACCCATTG
CAAACCGAGATCATTTTTCAGCTAGATAAGGAAACAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comC | Haemophilus influenzae Rd KW20 |
98.266 |
100 |
0.983 |