Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQL46_RS04465 | Genome accession | NZ_LS483482 |
| Coordinates | 962415..962816 (+) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain NCTC12217 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 957415..967816
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL46_RS04440 (NCTC12217_00903) | - | 958700..959101 (+) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
| DQL46_RS04445 (NCTC12217_00904) | - | 959239..959472 (+) | 234 | WP_002478965.1 | DUF1146 family protein | - |
| DQL46_RS04450 (NCTC12217_00905) | murA | 959636..960901 (+) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQL46_RS04455 (NCTC12217_00906) | fabZ | 960938..961378 (+) | 441 | WP_002461222.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DQL46_RS04460 (NCTC12217_00907) | - | 961774..962226 (-) | 453 | WP_080606538.1 | YwpF-like family protein | - |
| DQL46_RS04465 (NCTC12217_00908) | ssb | 962415..962816 (+) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL46_RS04470 (NCTC12217_00909) | - | 963295..964002 (+) | 708 | WP_062077890.1 | transglycosylase family protein | - |
| DQL46_RS04475 (NCTC12217_00911) | tenA | 964415..965092 (+) | 678 | WP_070647980.1 | thiaminase II | - |
| DQL46_RS04480 (NCTC12217_00912) | thiD | 965097..965918 (+) | 822 | WP_002478968.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQL46_RS04485 (NCTC12217_00913) | thiM | 965911..966699 (+) | 789 | WP_080606539.1 | hydroxyethylthiazole kinase | - |
| DQL46_RS04490 (NCTC12217_00914) | thiE | 966702..967340 (+) | 639 | WP_002461213.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=1142508 DQL46_RS04465 WP_002461219.1 962415..962816(+) (ssb) [Staphylococcus lugdunensis strain NCTC12217]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=1142508 DQL46_RS04465 WP_002461219.1 962415..962816(+) (ssb) [Staphylococcus lugdunensis strain NCTC12217]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |