Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQN71_RS02400 Genome accession   NZ_LS483471
Coordinates   462372..463631 (+) Length   419 a.a.
NCBI ID   WP_015605284.1    Uniprot ID   -
Organism   Streptococcus cristatus strain NCTC13807     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 457372..468631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS02375 (NCTC13807_00460) - 457499..457741 (+) 243 WP_005592291.1 hypothetical protein -
  DQN71_RS02380 (NCTC13807_00461) tkt 457938..459914 (+) 1977 WP_015605287.1 transketolase -
  DQN71_RS02385 (NCTC13807_00462) yajC 460181..460516 (+) 336 WP_005591861.1 preprotein translocase subunit YajC -
  DQN71_RS02390 (NCTC13807_00463) - 460734..461483 (+) 750 WP_015605286.1 isoprenyl transferase -
  DQN71_RS02395 (NCTC13807_00464) - 461499..462302 (+) 804 WP_015605285.1 phosphatidate cytidylyltransferase -
  DQN71_RS02400 (NCTC13807_00465) eeP 462372..463631 (+) 1260 WP_015605284.1 RIP metalloprotease RseP Regulator
  DQN71_RS02405 (NCTC13807_00466) - 463649..465499 (+) 1851 WP_015605283.1 proline--tRNA ligase -
  DQN71_RS02415 (NCTC13807_00467) - 465740..466123 (+) 384 WP_172456442.1 PH domain-containing protein -
  DQN71_RS02420 (NCTC13807_00468) - 466224..466691 (-) 468 WP_015605281.1 hypothetical protein -
  DQN71_RS02425 (NCTC13807_00469) - 466844..467386 (-) 543 WP_015605280.1 lipoprotein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46429.99 Da        Isoelectric Point: 6.2623

>NTDB_id=1142297 DQN71_RS02400 WP_015605284.1 462372..463631(+) (eeP) [Streptococcus cristatus strain NCTC13807]
MQIITFIIIFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGEDSTEIKTG
TPVSLTLNEEGKVVRINLSGKKIDQTALPMNVTSFDFEEKLEITGLVLDERKTYSVDHDATIVEEDETEVRIAPLDVQYQ
NATIWGRLITNFAGPMNNFILSIVVYSLLAFMQGGAVDYYSNHVQVVPQGVVAKAGLKDNDQIVQINEYKVSNWDELTDS
VQKATRNKGKNPEVTITYERDGKTQKVTVQPEEDGGRYYIGVTNAVKTGFVDKLFSGVTDTWYTATRILTALKDIIFHFS
LNKLGGPVAIYKASSQAAELGLPAILSLMAMLSINIGIFNLIPIPALDGGKILINLIELVRRKPLKQEVETYLTLAGVVV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1142297 DQN71_RS02400 WP_015605284.1 462372..463631(+) (eeP) [Streptococcus cristatus strain NCTC13807]
ATGCAGATTATTACATTTATTATTATTTTTGGGATCATCGTGGTGGTTCATGAGTTTGGACATTTCTACTTTGCCAAAAA
ATCAGGTATTCTTGTTCGTGAGTTTGCCATTGGGATGGGCCCGAAAATCTTTGCTCATATTGGCAAGGACGGAACAGCCT
ACACGATTCGGATTCTGCCGCTAGGTGGATATGTCCGTATGGCTGGCTGGGGCGAGGATTCGACAGAAATCAAAACAGGT
ACGCCAGTCAGTCTAACTCTGAACGAAGAGGGAAAAGTCGTCCGCATCAATCTGTCTGGCAAGAAAATCGATCAGACGGC
TCTGCCTATGAATGTGACCAGTTTTGATTTTGAAGAAAAACTGGAGATTACTGGGCTAGTCTTAGATGAAAGAAAGACTT
ATTCTGTCGATCACGATGCGACTATTGTTGAGGAAGATGAAACGGAAGTTCGGATTGCCCCGCTGGATGTCCAGTATCAA
AATGCGACGATCTGGGGACGTCTCATCACCAATTTTGCTGGTCCGATGAACAACTTTATCTTAAGTATTGTCGTGTACTC
TCTCCTTGCCTTTATGCAGGGAGGTGCAGTGGACTACTATAGCAACCATGTTCAAGTCGTTCCCCAAGGAGTGGTGGCTA
AGGCTGGTTTGAAAGACAATGACCAGATCGTTCAAATCAATGAATACAAGGTCTCCAACTGGGATGAGTTGACAGATTCT
GTCCAGAAGGCGACCCGTAACAAAGGAAAAAATCCAGAAGTAACGATTACCTATGAACGAGACGGGAAAACTCAAAAAGT
GACGGTTCAACCAGAAGAAGATGGGGGACGGTATTATATCGGTGTGACCAATGCTGTCAAGACAGGCTTCGTAGATAAGC
TTTTCTCAGGTGTGACAGATACCTGGTACACAGCAACTCGTATTTTGACGGCCTTGAAGGATATCATCTTCCACTTTAGT
TTGAACAAGTTGGGTGGTCCGGTAGCGATCTACAAAGCTAGTTCGCAAGCTGCGGAGCTAGGACTTCCAGCTATCCTATC
CTTGATGGCCATGCTGTCTATTAATATCGGAATCTTTAACTTGATTCCTATTCCGGCTTTGGATGGTGGGAAAATCTTAA
TCAATCTGATCGAGCTTGTTCGTAGAAAACCTCTTAAACAGGAGGTAGAAACCTACTTGACCCTTGCTGGAGTGGTGGTC
ATGGTTATCTTGATGATTGCTGTGACTTGGAACGATATCATGAAATTATTTTTGAAATAG

Domains


Predicted by InterproScan.

(5-404)

(204-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.468

99.523

0.652

  eeP Streptococcus thermophilus LMG 18311

65.228

99.523

0.649


Multiple sequence alignment