Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN71_RS01825 Genome accession   NZ_LS483471
Coordinates   327335..328066 (+) Length   243 a.a.
NCBI ID   WP_015604426.1    Uniprot ID   A0A512AD74
Organism   Streptococcus cristatus strain NCTC13807     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 322335..333066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS01795 (NCTC13807_00344) - 322363..322914 (+) 552 WP_015604421.1 CvpA family protein -
  DQN71_RS01800 (NCTC13807_00345) - 322984..325317 (+) 2334 WP_015604422.1 endonuclease MutS2 -
  DQN71_RS01805 (NCTC13807_00346) trxA 325411..325725 (+) 315 WP_015604423.1 thioredoxin -
  DQN71_RS01810 - 326214..326508 (+) 295 Protein_301 IS3 family transposase -
  DQN71_RS01815 (NCTC13807_00347) - 326564..326839 (-) 276 WP_015604424.1 hypothetical protein -
  DQN71_RS01820 (NCTC13807_00348) - 326849..327259 (-) 411 WP_015604425.1 HIT family protein -
  DQN71_RS01825 (NCTC13807_00349) pptA 327335..328066 (+) 732 WP_015604426.1 ABC transporter ATP-binding protein Regulator
  DQN71_RS01830 (NCTC13807_00350) - 328063..329109 (+) 1047 WP_015604427.1 ABC transporter permease -
  DQN71_RS01835 (NCTC13807_00351) ccrZ 329160..329954 (+) 795 WP_015604428.1 cell cycle regulator CcrZ -
  DQN71_RS01840 (NCTC13807_00352) trmB 329951..330589 (+) 639 WP_015604429.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27151.72 Da        Isoelectric Point: 4.7285

>NTDB_id=1142295 DQN71_RS01825 WP_015604426.1 327335..328066(+) (pptA) [Streptococcus cristatus strain NCTC13807]
MLEIKGLTGGYINIPVLKDISFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYKGEIRIDGLQLRENPSAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIEQEVAFERVESLLTIFRLKDKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIQLLDEEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAELRVQFQMPEASLNDIYLALTEE
VAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1142295 DQN71_RS01825 WP_015604426.1 327335..328066(+) (pptA) [Streptococcus cristatus strain NCTC13807]
ATGTTAGAAATCAAAGGCCTTACAGGAGGCTATATTAACATTCCTGTTTTGAAAGATATTAGCTTTGAAGTGGGCGATGG
TCAGCTGGTTGGGCTGATTGGTCTCAATGGTGCTGGTAAATCCACCACCATCAATGAAATTATCGGTTTATTGACGCCTT
ATAAGGGAGAAATTCGGATTGATGGTTTGCAGCTGCGAGAAAATCCTAGTGCCTACCGTAAGAAGATTGGTTTTATCCCA
GAGACACCGAGTCTCTACGAAGAGCTGACCCTACGTGAGCATATTGAAACGGTGGCCATGGCTTACGATATCGAGCAGGA
AGTTGCTTTTGAGCGCGTGGAGAGCTTGTTGACTATCTTCCGACTGAAGGATAAATTGGACTGGTTTCCAGTGCATTTCT
CTAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTCGTGGTAGATCCTAGTCTTTTTATCGTGGACGAACCCTTT
TTGGGGCTGGATCCGGTAGCTATTGCAGACCTTATCCAGCTCTTGGATGAGGAAAAGAAAAAAGGTAAATCCATCCTCAT
GAGTACCCACGTACTGGATTCGGCTGAGAAGATGTGTGATAGCTTTGTGATTTTGCATAAAGGGCAGGTGCGCGCTAAGG
GCAATTTAGCTGAGTTGCGAGTGCAATTTCAGATGCCGGAAGCTAGTCTCAATGACATCTATCTTGCCTTGACGGAAGAG
GTTGCCTTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712
  pptA Streptococcus thermophilus LMD-9

71.548

98.354

0.704

Multiple sequence alignment