Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   DQK98_RS09575 Genome accession   NZ_LS483449
Coordinates   1800595..1801215 (-) Length   206 a.a.
NCBI ID   WP_000839909.1    Uniprot ID   A0A098Z2X2
Organism   Streptococcus pneumoniae strain 4041STDY6836170     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1795595..1806215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQK98_RS09550 recA 1795973..1797139 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  DQK98_RS09555 cinA 1797194..1798450 (-) 1257 WP_061384489.1 competence/damage-inducible protein A Machinery gene
  DQK98_RS09560 brpA 1798534..1799550 (-) 1017 WP_000239284.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQK98_RS09565 - 1799558..1800076 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  DQK98_RS09570 tsaE 1800066..1800509 (-) 444 WP_000288230.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQK98_RS09575 comM 1800595..1801215 (-) 621 WP_000839909.1 hypothetical protein Regulator
  DQK98_RS09585 - 1801598..1802461 (-) 864 WP_050089664.1 helix-turn-helix domain-containing protein -
  DQK98_RS09590 - 1802650..1802820 (+) 171 WP_000742179.1 PhrA family quorum-sensing system peptide -
  DQK98_RS09595 - 1802965..1804980 (+) 2016 WP_111688177.1 DUF1430 domain-containing protein -
  DQK98_RS09600 - 1804982..1805614 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -
  DQK98_RS12275 - 1805755..1806033 (+) 279 WP_000712962.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23540.66 Da        Isoelectric Point: 10.1254

>NTDB_id=1141925 DQK98_RS09575 WP_000839909.1 1800595..1801215(-) (comM) [Streptococcus pneumoniae strain 4041STDY6836170]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYTGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1141925 DQK98_RS09575 WP_000839909.1 1800595..1801215(-) (comM) [Streptococcus pneumoniae strain 4041STDY6836170]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATACTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098Z2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment