Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQK98_RS01445 Genome accession   NZ_LS483449
Coordinates   257029..258288 (+) Length   419 a.a.
NCBI ID   WP_000900665.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 4041STDY6836170     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 252029..263288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQK98_RS01415 - 252558..253286 (+) 729 WP_000928810.1 ABC transporter permease -
  DQK98_RS01420 - 253429..253521 (-) 93 WP_000969509.1 type I toxin-antitoxin system Fst family toxin -
  DQK98_RS01425 ruvB 253655..254653 (+) 999 WP_001810337.1 Holliday junction branch migration DNA helicase RuvB -
  DQK98_RS01430 - 254634..255206 (+) 573 WP_041171033.1 nucleotidyltransferase family protein -
  DQK98_RS01435 - 255437..256195 (+) 759 WP_000466720.1 isoprenyl transferase -
  DQK98_RS01440 - 256204..257007 (+) 804 WP_050089441.1 phosphatidate cytidylyltransferase -
  DQK98_RS01445 eeP 257029..258288 (+) 1260 WP_000900665.1 RIP metalloprotease RseP Regulator
  DQK98_RS01450 - 258301..260154 (+) 1854 WP_000814072.1 proline--tRNA ligase -
  DQK98_RS01455 bglA 260253..261632 (+) 1380 WP_000943509.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45863.62 Da        Isoelectric Point: 6.5108

>NTDB_id=1141882 DQK98_RS01445 WP_000900665.1 257029..258288(+) (eeP) [Streptococcus pneumoniae strain 4041STDY6836170]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWVLIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVETETKDKTAPTLDVTISEKGSDKQVTVTPKDSQGRYLLGVQPGVKSDFLSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENILYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1141882 DQK98_RS01445 WP_000900665.1 257029..258288(+) (eeP) [Streptococcus pneumoniae strain 4041STDY6836170]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGGCACTTCTACTTTGCCAA
GAAATCAGGGATTTTAGTACGTGAATTTGCCATCGGTATGGGACCTAAAATCTTTGCTCACATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTCCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACGCCTGTTAGTTTGACACTTGCTGATGATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGGATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAAGGATTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGCAAACTGATTACCAATTTTGCAGGTCCTATGAACAATTTTATCTTAGGTGTCGTTGTTTT
TTGGGTTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTTGATACCAATCAGTTCCATATCATGCCCCAAGGTGCCTTGG
CCAAGGTAGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGCTTGATCCAA
GCTGTGGAAACAGAAACCAAAGATAAGACGGCACCGACTTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACACCCAAAGATAGTCAAGGTCGTTACCTTCTAGGTGTTCAACCGGGGGTTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCAGCTCTCCGAATTCTCTCAGCTCTGAAAAATCTGATTTTCCAACCAGAT
TTGAACAAGTTGGGTGGACCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAAAATATCTTGTA
CTTCTTGGCAATGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCTTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCCATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.81

100

0.64

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment