Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DQL20_RS10140 | Genome accession | NZ_LS483444 |
| Coordinates | 2019516..2021945 (-) | Length | 809 a.a. |
| NCBI ID | WP_006595444.1 | Uniprot ID | E7S8Z3 |
| Organism | Streptococcus australis strain NCTC13166 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2014516..2026945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL20_RS10110 (NCTC11371_01971) | - | 2014871..2015668 (-) | 798 | WP_006595450.1 | NUDIX domain-containing protein | - |
| DQL20_RS10115 (NCTC11371_01972) | pnuC | 2015669..2016451 (-) | 783 | WP_006595449.1 | nicotinamide riboside transporter PnuC | - |
| DQL20_RS10120 (NCTC11371_01973) | - | 2016464..2017522 (-) | 1059 | WP_006595448.1 | AAA family ATPase | - |
| DQL20_RS10125 (NCTC11371_01974) | - | 2017725..2018468 (-) | 744 | WP_006597008.1 | hypothetical protein | - |
| DQL20_RS10130 (NCTC11371_01975) | - | 2018631..2019035 (-) | 405 | WP_006595446.1 | DUF4430 domain-containing protein | - |
| DQL20_RS10135 (NCTC11371_01976) | - | 2019016..2019504 (-) | 489 | WP_006595445.1 | ECF transporter S component | - |
| DQL20_RS10140 (NCTC11371_01977) | clpC | 2019516..2021945 (-) | 2430 | WP_006595444.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQL20_RS10145 (NCTC11371_01978) | - | 2021953..2022411 (-) | 459 | WP_006597009.1 | CtsR family transcriptional regulator | - |
| DQL20_RS10150 (NCTC11371_01979) | - | 2022640..2026335 (-) | 3696 | WP_040802884.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89852.43 Da Isoelectric Point: 5.7004
>NTDB_id=1141759 DQL20_RS10140 WP_006595444.1 2019516..2021945(-) (clpC) [Streptococcus australis strain NCTC13166]
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKSNYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTPADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SAQLNFTID
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKSNYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTPADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SAQLNFTID
Nucleotide
Download Length: 2430 bp
>NTDB_id=1141759 DQL20_RS10140 WP_006595444.1 2019516..2021945(-) (clpC) [Streptococcus australis strain NCTC13166]
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACACTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCCATGCAGA
TTGATGATTTTCAAGATGCAGCAGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAAGCAGTCCATGCCAAAAGTCTGGGAACAGAGCA
TGTCCTCTTGGCGCTCCTACTAGAGCGGGGAACCCTAGCTTCGCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGATGGCATAAAAATCGTCGAACTTCGTAAGAGTTTGGAACAGCGAGCAGGTTGGGACAAGGAGGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGGCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCGGCCTCTACTAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGGCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACAAAAAACAATCCGGTCCTCGTTGGAGATGCGGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGCGGCGATGTTCCAACGGAGCTTGCTAAGATGCGTGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGAACGCGGTTCCGTGGTGATTTTGAAGAGCGGATGAACAACATCATCAATGACA
TTGAAGAAGATGGCCATGTCATCCTCTTCATTGATGAGCTCCATACCATTATGGGCTCTGGTTCTGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGTGGAACACTACGGACCGTAGGGGCTACTACGCAAGAAGAATA
CCAGAAACACATTGAAAAAGATGCCGCTTTGTCACGCCGCTTTGCTAAGGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATCGCGATTTTACAAGGGCTCAAGAGCAACTATGAACGTCACCACCGCGTCCATATTACGGATGCAGCCATTGAGACA
GCTGTTGTCTATGCTAATCGGTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACCGTGCAAAACAAGGGACCTCAAGCGGGTCTTCAGTCTGATTTGACACCTGCCGACCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCAAAAGGCTACCAGCTAGAAGTCAAGGAAGAGGATATCCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACGCAAACAGCGGCTAAGAAATACCTGGAATTAGAAGC
GGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCCGTCTCAAGCATCAGCCGAGCAATACGCCGCAATCAGTCTGGAA
TCCGGTCCCACAAGCGACCAATCGGTTCCTTCCTCTTCCTCGGTCCTACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCC
CTTGCAGAAGTTCTCTTTGATGACGAGTCAGCCTTGATCCGTTTTGACATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGTCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGGGGCGAGTTGACGGAAAAAGTTCGCAACAAACCTT
ATTCTGTCCTCTTGTTTGATGAGGTAGAAAAAGCTCATCCGGATATCTTTAACGTTCTTTTGCAAGTTCTGGATGACGGG
GTCTTAACTGATAGCAAGGGACGCAAGGTAGATTTCTCCAATACGATTATTATCATGACGTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGTTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATCTTCG
AAGAGTTGAAGAAGACCTATCGCCCAGAGTTTATCAACCGGATTGATGAAAAGGTTGTCTTCCATAGCTTAACCAGTGAC
CAAATGCACGAGATTGTCAAGATTATGGTGAAACCCTTGGTTCAATCTCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCATCTGCCCTTAAATGGCTGGCAACTCATGGATATGATCCAGAGATGGGAGCGCGTCCTTTGCGTCGGACCATTCAGA
CCCAAGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACTCTCAAGGTAGGTGTCAAG
TCTGCTCAGCTTAACTTCACGATTGACTAG
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACACTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCCATGCAGA
TTGATGATTTTCAAGATGCAGCAGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAAGCAGTCCATGCCAAAAGTCTGGGAACAGAGCA
TGTCCTCTTGGCGCTCCTACTAGAGCGGGGAACCCTAGCTTCGCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGATGGCATAAAAATCGTCGAACTTCGTAAGAGTTTGGAACAGCGAGCAGGTTGGGACAAGGAGGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGGCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCGGCCTCTACTAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGGCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACAAAAAACAATCCGGTCCTCGTTGGAGATGCGGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGCGGCGATGTTCCAACGGAGCTTGCTAAGATGCGTGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGAACGCGGTTCCGTGGTGATTTTGAAGAGCGGATGAACAACATCATCAATGACA
TTGAAGAAGATGGCCATGTCATCCTCTTCATTGATGAGCTCCATACCATTATGGGCTCTGGTTCTGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGTGGAACACTACGGACCGTAGGGGCTACTACGCAAGAAGAATA
CCAGAAACACATTGAAAAAGATGCCGCTTTGTCACGCCGCTTTGCTAAGGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATCGCGATTTTACAAGGGCTCAAGAGCAACTATGAACGTCACCACCGCGTCCATATTACGGATGCAGCCATTGAGACA
GCTGTTGTCTATGCTAATCGGTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACCGTGCAAAACAAGGGACCTCAAGCGGGTCTTCAGTCTGATTTGACACCTGCCGACCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCAAAAGGCTACCAGCTAGAAGTCAAGGAAGAGGATATCCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACGCAAACAGCGGCTAAGAAATACCTGGAATTAGAAGC
GGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCCGTCTCAAGCATCAGCCGAGCAATACGCCGCAATCAGTCTGGAA
TCCGGTCCCACAAGCGACCAATCGGTTCCTTCCTCTTCCTCGGTCCTACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCC
CTTGCAGAAGTTCTCTTTGATGACGAGTCAGCCTTGATCCGTTTTGACATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGTCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGGGGCGAGTTGACGGAAAAAGTTCGCAACAAACCTT
ATTCTGTCCTCTTGTTTGATGAGGTAGAAAAAGCTCATCCGGATATCTTTAACGTTCTTTTGCAAGTTCTGGATGACGGG
GTCTTAACTGATAGCAAGGGACGCAAGGTAGATTTCTCCAATACGATTATTATCATGACGTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGTTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATCTTCG
AAGAGTTGAAGAAGACCTATCGCCCAGAGTTTATCAACCGGATTGATGAAAAGGTTGTCTTCCATAGCTTAACCAGTGAC
CAAATGCACGAGATTGTCAAGATTATGGTGAAACCCTTGGTTCAATCTCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCATCTGCCCTTAAATGGCTGGCAACTCATGGATATGATCCAGAGATGGGAGCGCGTCCTTTGCGTCGGACCATTCAGA
CCCAAGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACTCTCAAGGTAGGTGTCAAG
TCTGCTCAGCTTAACTTCACGATTGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus pneumoniae D39 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus pneumoniae TIGR4 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus mutans UA159 |
66.176 |
100 |
0.667 |
| clpC | Streptococcus thermophilus LMD-9 |
65.361 |
100 |
0.66 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.361 |
100 |
0.66 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.798 |
100 |
0.502 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.134 |
100 |
0.459 |
| clpE | Streptococcus mutans UA159 |
48.796 |
77.009 |
0.376 |
| clpE | Streptococcus pneumoniae Rx1 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae D39 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.352 |
77.009 |
0.365 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.95 |
79.357 |
0.365 |