Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   DQL20_RS03735 Genome accession   NZ_LS483444
Coordinates   684295..686097 (+) Length   600 a.a.
NCBI ID   WP_006596645.1    Uniprot ID   E7SCC1
Organism   Streptococcus australis strain NCTC13166     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 679295..691097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL20_RS03710 (NCTC11371_00736) - 679730..680893 (+) 1164 WP_006596649.1 MFS transporter -
  DQL20_RS03715 (NCTC11371_00737) - 680974..682263 (+) 1290 WP_006596648.1 D-alanyl-D-alanine carboxypeptidase family protein -
  DQL20_RS03720 (NCTC11371_00738) - 682404..682958 (+) 555 WP_006596647.1 hypothetical protein -
  DQL20_RS03730 (NCTC11371_00739) coiA 683275..684225 (+) 951 WP_006596646.1 competence protein CoiA Machinery gene
  DQL20_RS03735 (NCTC11371_00740) pepF 684295..686097 (+) 1803 WP_006596645.1 oligoendopeptidase F Regulator
  DQL20_RS03740 (NCTC11371_00741) - 686099..686812 (+) 714 WP_006596644.1 O-methyltransferase -
  DQL20_RS03745 (NCTC11371_00742) - 686890..687831 (+) 942 WP_006596643.1 peptidylprolyl isomerase -
  DQL20_RS03755 (NCTC11371_00743) - 688122..688604 (+) 483 WP_006596642.1 LURP-one-related/scramblase family protein -

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 69202.31 Da        Isoelectric Point: 4.6174

>NTDB_id=1141742 DQL20_RS03735 WP_006596645.1 684295..686097(+) (pepF) [Streptococcus australis strain NCTC13166]
MVKQRNEIDEKYQWDLSTIFATDQAWEEEATVLAAAIKDAAHFAGSLLSSPANLLETTEVYLDLSRRLEKVYVYAHMKND
QDTRVAKYQEFQSKAMSLYSLLGETFAFYEPEFMEITEEQYANFLKEVPALEAYAHYFDKLLKTKEHVLSQKEEELLAGA
GEIFAAAGETFEILDNADIVFPMVKDDQGQEVQLTHGNYISLVESKNRQVRKEAYQALYGVYEQYQHTYAKTLQTNVKVH
NYNAKVRKFSSAREAALSANFIPESVYDSLVEAVNKHLPLLQRYVKLRSKILGIEDLKMYDVYTPLSSTDYKFTYEEALA
KSEQALAVLGDDYLSRVKRAFTERWIDVHVNQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEQLLAEVEDDETRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNELYADLNEKYYGLSKEDNPEIQYEWARIPHFYYNYYVFQYSTGFAAASALAEKIVHGTQEDKDKYLEYLKAGNSDYPL
NVIRKAGVDMEKEDYLHAAFEVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1141742 DQL20_RS03735 WP_006596645.1 684295..686097(+) (pepF) [Streptococcus australis strain NCTC13166]
ATGGTAAAACAACGAAATGAAATTGATGAAAAATACCAATGGGATTTGTCGACCATTTTTGCGACAGACCAAGCTTGGGA
AGAAGAAGCAACTGTTTTAGCTGCAGCTATTAAAGATGCTGCCCATTTTGCAGGCTCTTTATTGTCTTCTCCAGCCAACC
TATTAGAAACCACAGAAGTTTATTTGGACTTGAGCCGTCGTTTGGAAAAGGTCTATGTCTACGCCCATATGAAGAATGAC
CAGGATACACGCGTAGCCAAATACCAAGAATTCCAATCAAAAGCCATGTCTCTTTACAGCCTTTTAGGGGAGACCTTTGC
CTTCTACGAACCAGAATTTATGGAGATCACCGAAGAGCAATATGCCAACTTCTTGAAAGAAGTCCCTGCCTTAGAAGCTT
ACGCTCATTACTTTGATAAACTGCTCAAAACCAAAGAGCATGTCCTCTCTCAAAAAGAAGAAGAGTTGCTAGCAGGAGCG
GGTGAAATCTTTGCTGCTGCGGGTGAAACTTTTGAGATTTTGGACAATGCAGATATCGTCTTCCCGATGGTGAAGGATGA
CCAAGGACAAGAAGTGCAGTTGACCCATGGAAACTATATTTCTTTGGTAGAGTCTAAGAACCGCCAAGTCCGTAAGGAAG
CTTACCAGGCCTTGTATGGTGTCTACGAACAGTACCAACATACCTATGCTAAGACCCTTCAGACCAACGTCAAGGTTCAC
AATTACAATGCCAAGGTTCGCAAATTCTCAAGTGCGCGTGAGGCAGCTCTTTCTGCTAACTTTATCCCTGAAAGCGTCTA
TGACAGCTTGGTAGAAGCGGTGAACAAGCACTTGCCTTTGTTACAACGCTACGTGAAACTCCGCTCAAAAATCTTGGGAA
TTGAAGATTTGAAGATGTATGATGTCTACACACCATTATCTTCTACCGATTACAAGTTCACCTATGAAGAAGCCCTTGCC
AAGTCTGAGCAAGCTTTGGCGGTGCTTGGTGATGACTACCTATCCCGCGTGAAGCGCGCCTTCACTGAACGTTGGATCGA
TGTCCATGTCAACCAAGGAAAACGCTCAGGTGCCTATTCAGGTGGATCGTATGACACCAATGCCTTTATGTTGTTGAACT
GGCAAGATACATTGGATAATCTTTTCACCTTGGTTCATGAGACTGGTCACAGTATGCACTCCAGCTATACCCGTGAAACC
CAGCCTTATGTCTATGGGGATTATTCTATCTTCCTTGCTGAGATTGCTTCCACAACCAATGAAAATATCTTGACCGAGCA
ACTGTTAGCTGAAGTAGAAGATGATGAAACCCGTTTTGCTATTCTCAACCACTTCTTGGATGGTTTCCGTGGTACGGTCT
TCCGTCAAACCCAGTTTGCTGAGTTTGAACATGCGATTCACAAGGCCGACCAAGAAGGACAAGTCTTGACCAGCGAATTC
TTGAATGAACTGTATGCGGACTTGAATGAGAAATACTATGGTCTTTCAAAAGAAGACAATCCAGAAATCCAATACGAATG
GGCTCGCATTCCTCATTTCTACTATAACTACTATGTTTTCCAATATTCAACTGGTTTTGCAGCAGCCTCTGCCTTGGCTG
AGAAAATCGTTCATGGAACACAGGAAGATAAGGACAAATACCTAGAGTATTTGAAAGCTGGAAATTCGGATTATCCACTC
AATGTGATCCGCAAGGCGGGTGTCGATATGGAAAAAGAAGACTACCTCCATGCAGCCTTTGAAGTCTTTGAACGTCGTCT
CAACGAATTTGAGGCACTGGTTGAAAAATTAGGATTGGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E7SCC1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.295

99.333

0.688


Multiple sequence alignment