Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQN42_RS08265 Genome accession   NZ_LS483436
Coordinates   1677439..1678710 (-) Length   423 a.a.
NCBI ID   WP_003076026.1    Uniprot ID   -
Organism   Streptococcus intermedius strain NCTC11324     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1672439..1683710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN42_RS08250 (NCTC11324_01662) - 1673148..1674452 (-) 1305 WP_037589417.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  DQN42_RS08255 (NCTC11324_01663) - 1674654..1675292 (-) 639 WP_003075800.1 hypothetical protein -
  DQN42_RS08260 (NCTC11324_01664) - 1675546..1677405 (-) 1860 WP_003075896.1 proline--tRNA ligase -
  DQN42_RS08265 (NCTC11324_01665) eeP 1677439..1678710 (-) 1272 WP_003076026.1 RIP metalloprotease Regulator
  DQN42_RS08270 (NCTC11324_01666) - 1678862..1679665 (-) 804 WP_003074045.1 phosphatidate cytidylyltransferase -
  DQN42_RS08275 (NCTC11324_01667) - 1679674..1680423 (-) 750 WP_003074042.1 isoprenyl transferase -
  DQN42_RS08280 (NCTC11324_01668) yajC 1680891..1681229 (-) 339 WP_003076043.1 preprotein translocase subunit YajC -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45763.57 Da        Isoelectric Point: 9.5024

>NTDB_id=1141464 DQN42_RS08265 WP_003076026.1 1677439..1678710(-) (eeP) [Streptococcus intermedius strain NCTC11324]
MQSGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGDDAT
EIKTGTPASLTLNEASKVIRINLSGKKIDQTALPMNVTGFDLEDKLEITGLVLDEQKTYAVDHDATIVEEDGTEVRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=1141464 DQN42_RS08265 WP_003076026.1 1677439..1678710(-) (eeP) [Streptococcus intermedius strain NCTC11324]
ATGCAATCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATTATTGTTGTCGTTCATGAATTTGGACATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTACGCGAGTTTTCCATTGGAATGGGTCCAAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTAGGTGGCTATGTTCGTATGGCAGGCTGGGGTGATGACGCAACA
GAGATTAAGACGGGAACACCTGCTAGTTTGACTTTAAATGAAGCAAGCAAGGTTATCCGAATCAATCTTTCGGGCAAGAA
AATCGACCAGACGGCTTTGCCCATGAATGTGACAGGCTTTGATTTGGAAGATAAGCTTGAAATCACTGGTTTGGTACTAG
ATGAGCAAAAAACGTATGCGGTTGACCATGACGCAACAATCGTAGAAGAAGACGGTACAGAAGTGAGGATTGCACCACTT
GATGTCCAATATCAAAATGCCAGCCTTGGTGGTCGCCTCATTACCAATTTTGCGGGACCAATGAACAACTTCATTTTGGG
AATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCCATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTCGCTGTTATGGTGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains


Predicted by InterproScan.

(10-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.072

98.818

0.643

  eeP Streptococcus thermophilus LMD-9

64.833

98.818

0.641


Multiple sequence alignment