Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | DQN42_RS02300 | Genome accession | NZ_LS483436 |
| Coordinates | 453481..454536 (+) | Length | 351 a.a. |
| NCBI ID | WP_003078259.1 | Uniprot ID | - |
| Organism | Streptococcus intermedius strain NCTC11324 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 448481..459536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN42_RS02270 (NCTC11324_00461) | - | 448999..449634 (-) | 636 | WP_003073631.1 | YigZ family protein | - |
| DQN42_RS02275 (NCTC11324_00462) | comFA/cflA | 449691..450992 (+) | 1302 | WP_003078363.1 | DEAD/DEAH box helicase | Machinery gene |
| DQN42_RS02280 (NCTC11324_00463) | - | 450989..451654 (+) | 666 | WP_003078227.1 | ComF family protein | - |
| DQN42_RS02285 (NCTC11324_00464) | hpf | 451733..452275 (+) | 543 | WP_003073626.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| DQN42_RS02290 (NCTC11324_00465) | rsmD | 452474..453013 (+) | 540 | WP_003078233.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| DQN42_RS02295 (NCTC11324_00466) | coaD | 453003..453500 (+) | 498 | WP_003078294.1 | pantetheine-phosphate adenylyltransferase | - |
| DQN42_RS02300 (NCTC11324_00467) | sepM | 453481..454536 (+) | 1056 | WP_003078259.1 | SepM family pheromone-processing serine protease | Regulator |
| DQN42_RS02305 (NCTC11324_00468) | - | 454817..455380 (+) | 564 | WP_004234076.1 | YutD family protein | - |
| DQN42_RS02310 (NCTC11324_00469) | rlmN | 455414..456496 (+) | 1083 | WP_003078352.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| DQN42_RS02315 (NCTC11324_00470) | - | 456489..457007 (+) | 519 | WP_003078328.1 | VanZ family protein | - |
| DQN42_RS02320 (NCTC11324_00471) | cclA/cilC | 456993..457676 (-) | 684 | WP_003073610.1 | A24 family peptidase | Machinery gene |
| DQN42_RS02325 (NCTC11324_00472) | - | 457827..458354 (+) | 528 | WP_003078413.1 | Dps family protein | - |
| DQN42_RS02330 (NCTC11324_00473) | - | 458617..458841 (+) | 225 | WP_003073604.1 | YqgQ family protein | - |
| DQN42_RS02335 (NCTC11324_00474) | - | 458835..459215 (+) | 381 | WP_003078427.1 | rhodanese-like domain-containing protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38507.52 Da Isoelectric Point: 10.2603
>NTDB_id=1141429 DQN42_RS02300 WP_003078259.1 453481..454536(+) (sepM) [Streptococcus intermedius strain NCTC11324]
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
ETAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
ETAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
Nucleotide
Download Length: 1056 bp
>NTDB_id=1141429 DQN42_RS02300 WP_003078259.1 453481..454536(+) (sepM) [Streptococcus intermedius strain NCTC11324]
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTGGTAGGGTTGGTCCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGTCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACAAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTTTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAACTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTGGTAGGGTTGGTCCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGTCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACAAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTTTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAACTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
63.188 |
98.291 |
0.621 |