Detailed information NTG1141192

Bioinformatically predicted

Overview

• Name: comL
• Type: Machinery gene
• Locus tag: DQN52_RS07545
• Genome accession: NZ_LS483426
• Coordinates: 1406043..1406849 (-)
• Length: 268 a.a.
• NCBI ID: WP_003786937.1
• Uniprot ID: A0AAX2J545
• Organism: Kingella kingae strain NCTC10529
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1401043..1411849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN52_RS07515 (NCTC10529_01460)	-	1401306..1401845 (-)	540	WP_003786949.1	hypothetical protein	-
DQN52_RS07520 (NCTC10529_01461)	-	1401854..1402105 (-)	252	WP_003790504.1	acyl carrier protein	-
DQN52_RS07525 (NCTC10529_01462)	-	1402112..1402372 (-)	261	WP_003786945.1	phosphopantetheine-binding protein	-
DQN52_RS07530 (NCTC10529_01463)	-	1402580..1403149 (-)	570	WP_003786943.1	alpha/beta hydrolase-fold protein	-
DQN52_RS07535 (NCTC10529_01464)	lpdA	1403228..1405021 (-)	1794	WP_032827722.1	dihydrolipoyl dehydrogenase	-
DQN52_RS07540 (NCTC10529_01465)	folP	1405104..1405943 (-)	840	WP_003786939.1	dihydropteroate synthase	-
DQN52_RS07545 (NCTC10529_01466)	comL	1406043..1406849 (-)	807	WP_003786937.1	outer membrane protein assembly factor BamD	Machinery gene
DQN52_RS07550 (NCTC10529_01467)	rluD	1406850..1407965 (+)	1116	WP_003786935.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
DQN52_RS07555 (NCTC10529_01468)	rnc	1407969..1408694 (+)	726	WP_003786933.1	ribonuclease III	-
DQN52_RS07560 (NCTC10529_01469)	-	1408745..1409500 (-)	756	WP_111694402.1	IS5 family transposase	-
DQN52_RS07565 (NCTC10529_01470)	-	1409475..1409744 (-)	270	WP_071461657.1	transposase	-
DQN52_RS11195 (NCTC10529_01471)	-	1409769..1410032 (+)	264	WP_032133164.1	transposase	-
DQN52_RS11200 (NCTC10529_01472)	-	1410032..1410532 (+)	501	WP_268766544.1	IS5 family transposase	-
DQN52_RS07580 (NCTC10529_01473)	-	1410553..1411512 (-)	960	WP_003786931.1	calcium/sodium antiporter	-

Sequence

Protein

• Length: 268 a.a.
• Molecular weight: 31083.91 Da
• Isoelectric Point: 7.9338

>NTDB_id=1141192 DQN52_RS07545 WP_003786937.1 1406043..1406849(-) (comL) [Kingella kingae strain NCTC10529]
MKKFLLVISVAAALSACASNASTVSKDAQLTQNWSNDQLYSEARQELNDGNYTRATALYELLRARQADGRYTEQSLIESA
YAHFKNEEPAKALQNLARFEQNYPASVDMDYALYLKGLVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPN
SKYAEDARKRMAQLVDALGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADMAEATRR
VLAQNLPNSPYLQQAWKPDEMPWWRWWK

Nucleotide

• Length: 807 bp

>NTDB_id=1141192 DQN52_RS07545 WP_003786937.1 1406043..1406849(-) (comL) [Kingella kingae strain NCTC10529]
ATGAAAAAATTTCTTCTTGTTATTTCGGTTGCGGCGGCTCTTTCGGCTTGTGCCAGCAACGCTTCTACGGTTAGTAAAGA
CGCGCAATTAACGCAAAATTGGTCAAACGACCAGCTATACAGCGAAGCGCGTCAGGAATTAAATGACGGTAATTATACAC
GCGCAACGGCGTTATATGAATTGCTACGCGCACGCCAAGCCGATGGTCGCTATACCGAGCAATCTTTGATTGAATCTGCC
TATGCCCATTTTAAAAACGAAGAACCTGCCAAAGCCTTGCAAAATTTAGCACGCTTTGAGCAAAACTACCCTGCCAGCGT
GGATATGGATTACGCGCTATATTTGAAAGGTTTGGTGTTGTTTGCCGAAGACCAATCGTTCCTACGCCGTTTGGCATCAC
AAGACTGGTCAGACCGCGACCCAGAAGCCAACCGCCGCGCATTCCGCGTATTTGAACAGCTGGTTAATCGCTATCCAAAC
AGCAAATATGCCGAAGATGCGCGTAAACGTATGGCGCAGTTGGTTGATGCTTTGGGCGGGCACGAAATCGCGATTGCGCG
TTACTATGCCAAACGCACGGCATATTTAGCCGCCAACAATCGCGCTCAACGCATTTTGGAGCAATTCCAAAACACGCGCT
ATGTGGAAGAAGCGTTGGCGATTATGGTTTATACCTACGAGCAAATGGGTAACGCTGATATGGCAGAAGCCACACGCCGC
GTGTTGGCGCAAAACTTGCCCAACAGCCCATATTTGCAGCAGGCGTGGAAACCCGATGAGATGCCTTGGTGGCGTTGGTG
GAAATGA

Domains

Predicted by InterproScan.

• Outer membrane lipoprotein (YfiO) (35-239)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comL	Neisseria meningitidis MC58	58.052	99.627	0.578
comL	Neisseria gonorrhoeae MS11	57.678	99.627	0.575