Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DQN52_RS05900 | Genome accession | NZ_LS483426 |
| Coordinates | 1083530..1084060 (+) | Length | 176 a.a. |
| NCBI ID | WP_003785826.1 | Uniprot ID | A0AAX2J3W4 |
| Organism | Kingella kingae strain NCTC10529 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1078530..1089060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN52_RS05880 (NCTC10529_01148) | - | 1078595..1080964 (-) | 2370 | WP_003785821.1 | penicillin-binding protein 1A | - |
| DQN52_RS05885 (NCTC10529_01149) | pilM | 1081106..1082209 (+) | 1104 | WP_003785822.1 | type IV pilus biogenesis protein PilM | - |
| DQN52_RS05890 (NCTC10529_01150) | - | 1082211..1082870 (+) | 660 | WP_003785824.1 | PilN domain-containing protein | - |
| DQN52_RS05895 (NCTC10529_01151) | - | 1082873..1083496 (+) | 624 | WP_003785825.1 | type 4a pilus biogenesis protein PilO | - |
| DQN52_RS05900 (NCTC10529_01152) | pilP | 1083530..1084060 (+) | 531 | WP_003785826.1 | pilus assembly protein PilP | Machinery gene |
| DQN52_RS05905 (NCTC10529_01153) | pilQ | 1084094..1086196 (+) | 2103 | WP_003785828.1 | type IV pilus secretin PilQ | Machinery gene |
| DQN52_RS05910 (NCTC10529_01154) | - | 1086253..1086765 (+) | 513 | WP_111694434.1 | shikimate kinase | - |
| DQN52_RS05915 (NCTC10529_01155) | aroB | 1086765..1087847 (+) | 1083 | WP_003785833.1 | 3-dehydroquinate synthase | - |
| DQN52_RS05920 (NCTC10529_01156) | - | 1087866..1088282 (+) | 417 | WP_003785834.1 | ProQ/FINO family protein | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19408.16 Da Isoelectric Point: 5.2810
>NTDB_id=1141185 DQN52_RS05900 WP_003785826.1 1083530..1084060(+) (pilP) [Kingella kingae strain NCTC10529]
MKVKLFLMSALVLAGCSEQYGDLQEWMSQARAEAKTKVRPVEPLAPIEPVTYFAPQITGPNAFNMQRMKAAFQNGNAPDL
NRSKELLENYSLENLRYVGSIGTPGSLSALIEIQVNGEPHVYTVKQGNYLGQNFGRISKITADKIDLVETVEDTYGNWVN
RPAELLPMTDAAATAK
MKVKLFLMSALVLAGCSEQYGDLQEWMSQARAEAKTKVRPVEPLAPIEPVTYFAPQITGPNAFNMQRMKAAFQNGNAPDL
NRSKELLENYSLENLRYVGSIGTPGSLSALIEIQVNGEPHVYTVKQGNYLGQNFGRISKITADKIDLVETVEDTYGNWVN
RPAELLPMTDAAATAK
Nucleotide
Download Length: 531 bp
>NTDB_id=1141185 DQN52_RS05900 WP_003785826.1 1083530..1084060(+) (pilP) [Kingella kingae strain NCTC10529]
ATGAAAGTTAAATTATTTTTGATGTCAGCACTAGTGCTGGCAGGCTGTTCTGAACAGTATGGGGATTTGCAAGAGTGGAT
GAGTCAAGCAAGAGCAGAGGCAAAAACAAAAGTTCGCCCTGTTGAGCCTTTGGCACCGATTGAACCCGTTACTTATTTTG
CACCTCAAATTACAGGGCCGAATGCGTTTAATATGCAACGTATGAAAGCAGCTTTCCAAAATGGTAATGCGCCAGATTTG
AACCGAAGTAAAGAATTGCTAGAAAATTATAGCCTAGAGAATTTACGGTATGTTGGTTCAATTGGTACACCTGGTTCATT
ATCGGCTTTGATTGAAATCCAAGTAAATGGAGAGCCACACGTTTACACAGTGAAGCAAGGCAATTATTTGGGACAAAATT
TTGGTCGTATCTCTAAAATTACAGCGGATAAAATTGATTTGGTTGAAACTGTAGAAGATACGTATGGAAATTGGGTCAAT
CGACCAGCAGAGTTGCTGCCTATGACAGATGCAGCTGCTACTGCTAAATAA
ATGAAAGTTAAATTATTTTTGATGTCAGCACTAGTGCTGGCAGGCTGTTCTGAACAGTATGGGGATTTGCAAGAGTGGAT
GAGTCAAGCAAGAGCAGAGGCAAAAACAAAAGTTCGCCCTGTTGAGCCTTTGGCACCGATTGAACCCGTTACTTATTTTG
CACCTCAAATTACAGGGCCGAATGCGTTTAATATGCAACGTATGAAAGCAGCTTTCCAAAATGGTAATGCGCCAGATTTG
AACCGAAGTAAAGAATTGCTAGAAAATTATAGCCTAGAGAATTTACGGTATGTTGGTTCAATTGGTACACCTGGTTCATT
ATCGGCTTTGATTGAAATCCAAGTAAATGGAGAGCCACACGTTTACACAGTGAAGCAAGGCAATTATTTGGGACAAAATT
TTGGTCGTATCTCTAAAATTACAGCGGATAAAATTGATTTGGTTGAAACTGTAGAAGATACGTATGGAAATTGGGTCAAT
CGACCAGCAGAGTTGCTGCCTATGACAGATGCAGCTGCTACTGCTAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
51.497 |
94.886 |
0.489 |