Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQN57_RS02380 Genome accession   NZ_LS483415
Coordinates   431267..432076 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8304     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 426267..437076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN57_RS02360 (NCTC8304_00464) - 426709..427956 (+) 1248 WP_038433654.1 AMP-binding protein -
  DQN57_RS02365 (NCTC8304_00465) - 428012..429046 (+) 1035 WP_172453934.1 DUF3114 domain-containing protein -
  DQN57_RS02370 (NCTC8304_00466) vicR 429208..429918 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQN57_RS02375 (NCTC8304_00467) vicK 429911..431263 (+) 1353 WP_111705500.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQN57_RS02380 (NCTC8304_00468) vicX 431267..432076 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQN57_RS02385 (NCTC8304_00469) rnc 432508..433200 (+) 693 WP_002990670.1 ribonuclease III -
  DQN57_RS02390 (NCTC8304_00470) smc 433201..436740 (+) 3540 WP_111705501.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1140813 DQN57_RS02380 WP_002985641.1 431267..432076(+) (vicX) [Streptococcus pyogenes strain NCTC8304]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1140813 DQN57_RS02380 WP_002985641.1 431267..432076(+) (vicX) [Streptococcus pyogenes strain NCTC8304]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment