Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQN44_RS08885 Genome accession   NZ_LS483414
Coordinates   1708701..1709960 (-) Length   419 a.a.
NCBI ID   WP_030127332.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13736     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1703701..1714960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN44_RS08880 (NCTC13736_01762) - 1706647..1708503 (-) 1857 WP_030127331.1 proline--tRNA ligase -
  DQN44_RS08885 (NCTC13736_01763) eeP 1708701..1709960 (-) 1260 WP_030127332.1 RIP metalloprotease RseP Regulator
  DQN44_RS08890 (NCTC13736_01764) - 1710033..1710827 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  DQN44_RS08895 (NCTC13736_01765) - 1710840..1711589 (-) 750 WP_030127333.1 isoprenyl transferase -
  DQN44_RS08900 (NCTC13736_01766) yajC 1711808..1712173 (-) 366 WP_002988027.1 preprotein translocase subunit YajC -
  DQN44_RS08905 (NCTC13736_01767) - 1712289..1712663 (-) 375 WP_011184989.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45718.48 Da        Isoelectric Point: 9.4314

>NTDB_id=1140779 DQN44_RS08885 WP_030127332.1 1708701..1709960(-) (eeP) [Streptococcus pyogenes strain NCTC13736]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVDLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYNMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1140779 DQN44_RS08885 WP_030127332.1 1708701..1709960(-) (eeP) [Streptococcus pyogenes strain NCTC13736]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCAGGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGCGGTTATGTGCGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAGACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATAACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(206-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.571

100

0.687
  eeP Streptococcus thermophilus LMD-9

68.333

100

0.685

Multiple sequence alignment