Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DQN40_RS11460 Genome accession   NZ_LS483413
Coordinates   56508..56606 (+) Length   32 a.a.
NCBI ID   WP_014611913.1    Uniprot ID   A0A380JYX6
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 51508..61606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN40_RS00335 (NCTC7136_00068) - 52569..53825 (+) 1257 WP_003055555.1 DUF4041 domain-containing protein -
  DQN40_RS00340 (NCTC7136_00069) - 53818..54027 (+) 210 WP_014611912.1 hypothetical protein -
  DQN40_RS00345 (NCTC7136_00070) purB 54076..55368 (+) 1293 WP_003056595.1 adenylosuccinate lyase -
  DQN40_RS00350 (NCTC7136_00071) comR 55510..56421 (+) 912 WP_003060893.1 XRE family transcriptional regulator Regulator
  DQN40_RS11460 (NCTC7136_00072) comS 56508..56606 (+) 99 WP_014611913.1 quorum-sensing system DWW-type pheromone Regulator
  DQN40_RS00355 (NCTC7136_00073) ruvB 56640..57638 (+) 999 WP_015057190.1 Holliday junction branch migration DNA helicase RuvB -
  DQN40_RS00360 (NCTC7136_00074) - 57773..58204 (+) 432 WP_003059365.1 low molecular weight protein-tyrosine-phosphatase -
  DQN40_RS00365 (NCTC7136_00075) - 58233..58634 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  DQN40_RS00370 (NCTC7136_00076) - 58631..60406 (+) 1776 WP_003059359.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3771.59 Da        Isoelectric Point: 10.4764

>NTDB_id=1140732 DQN40_RS11460 WP_014611913.1 56508..56606(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
MFKKIKPYLLLAAVVAFKVARAMNEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=1140732 DQN40_RS11460 WP_014611913.1 56508..56606(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
ATGTTTAAAAAAATCAAACCATATTTGTTATTAGCCGCAGTCGTTGCTTTCAAAGTTGCTCGTGCAATGAACGAATTTGA
TTGGTGGAACCTAGGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JYX6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

84.375

100

0.844
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment