Detailed information NTG1140724

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DQN40_RS10125
• Genome accession: NZ_LS483413
• Coordinates: 1997193..1998245 (-)
• Length: 350 a.a.
• NCBI ID: WP_012767556.1
• Uniprot ID: A0A9X8T4H4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1992193..2003245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN40_RS10100 (NCTC7136_02095)	rimI	1992764..1993189 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
DQN40_RS10105 (NCTC7136_02096)	tsaB	1993191..1993889 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
DQN40_RS10110 (NCTC7136_02097)	-	1994175..1994405 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
DQN40_RS10115 (NCTC7136_02098)	rnjA	1994407..1996089 (+)	1683	WP_003056700.1	ribonuclease J1	-
DQN40_RS10120 (NCTC7136_02099)	amiF	1996268..1997200 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
DQN40_RS10125 (NCTC7136_02100)	oppD	1997193..1998245 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
DQN40_RS10130 (NCTC7136_02101)	-	1998257..1999288 (-)	1032	WP_065957283.1	ABC transporter permease	-
DQN40_RS10135 (NCTC7136_02102)	-	1999298..2000212 (-)	915	WP_003052794.1	ABC transporter permease	-
DQN40_RS10140 (NCTC7136_02103)	-	2000480..2002135 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38667.36 Da
• Isoelectric Point: 5.8490

>NTDB_id=1140724 DQN40_RS10125 WP_012767556.1 1997193..1998245(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNANLSGEIDFKGKKLNAL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENISKQKALSRALELMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKEIQQQTESSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTASGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVEAPPMFKVSDTHYAATWLL
DERAPKVTPPVQIQKRWAKWQKREGGKLNE

Nucleotide

• Length: 1053 bp

>NTDB_id=1140724 DQN40_RS10125 WP_012767556.1 1997193..1998245(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
ATGACAAACGAAACCATTTTAAGTGTTAAAAACCTCCACGTTGATTTCAAAACCTATGCAGGGGATGTGAAAGCTATTCG
CGATATTAGTTTTGACCTCAAAAAAGGAGAAACGCTTGCGATTGTTGGGGAATCTGGATCAGGAAAATCAGTGACCACTA
GGACCTTGATGGGCTTAAATGCTAAAAATGCTAACCTTTCTGGGGAAATTGATTTTAAAGGAAAAAAACTCAATGCCCTT
AAGGAAGAAGAATGGGTTAAGGTACGTGGTAAAGAAATTGCCATGATTTTCCAAGACCCAATGACCAGTCTCGATCCAAC
GATGAAAATCGGAATGCAAATTGCTGAAGCTATTTTGATTCATGAGAATATCAGTAAGCAAAAAGCCTTGAGTCGTGCTC
TTGAATTGATGCATCAAGTAGGTATTCCAAATGCTGAAGAGCATATTAATGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAGCGTGCTGTGATTGCTATCGCTCTCGCAGCTAATCCAGAAATCCTGATTGCTGATGAACCGACCACAGCACTTGA
TGTTACCATTCAGGCACAAATCTTGAAATTAATGAAAGAAATCCAACAACAGACGGAATCATCTATTATTTTCATTACCC
ATGACCTTGGAGTTGTGGCTGGTATGGCTGACCGTGTCGCGGTAATGTATGCTGGAAAAATTGTTGAGTATGGAACGGTG
GATGAAGTCTTTTATAACCCGCAACACCCTTATACATGGGGCTTGCTTAATTCTATGCCAACCACAGATACCGCCTCAGG
GAGTTTAGAATCTATTCCAGGAACGCCGCCTGACTTGCTTAATCCTCCTAAGGGAGATGCTTTTGCAGCCCGCAATGAAT
TTGCCTTGGATATTGATCATGTGGAGGCTCCGCCGATGTTTAAGGTCAGCGACACCCATTATGCGGCAACTTGGTTATTA
GATGAGCGAGCGCCCAAAGTCACTCCGCCAGTTCAAATTCAAAAACGATGGGCAAAATGGCAAAAACGAGAAGGAGGCAA
GCTAAATGAATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.429	100	0.794
amiE	Streptococcus salivarius strain HSISS4	55.394	98	0.543
amiE	Streptococcus thermophilus LMG 18311	56.325	94.857	0.534
amiE	Streptococcus thermophilus LMD-9	56.325	94.857	0.534