Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | DQN33_RS04160 | Genome accession | NZ_LS483408 |
| Coordinates | 809021..810250 (+) | Length | 409 a.a. |
| NCBI ID | WP_012658290.1 | Uniprot ID | A0A2X4EFJ3 |
| Organism | Streptococcus uberis strain NCTC4674 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 804021..815250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN33_RS04135 (NCTC4674_00855) | - | 804743..806029 (-) | 1287 | WP_231910408.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| DQN33_RS04140 (NCTC4674_00856) | - | 806016..807191 (-) | 1176 | WP_111673180.1 | hydroxymethylglutaryl-CoA synthase | - |
| DQN33_RS04145 (NCTC4674_00857) | - | 807386..808225 (+) | 840 | WP_012658287.1 | thymidylate synthase | - |
| DQN33_RS04150 (NCTC4674_00858) | - | 808305..808802 (+) | 498 | WP_012658288.1 | dihydrofolate reductase | - |
| DQN33_RS04160 (NCTC4674_00860) | clpX | 809021..810250 (+) | 1230 | WP_012658290.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| DQN33_RS04165 (NCTC4674_00861) | yihA | 810261..810860 (+) | 600 | WP_012658291.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DQN33_RS04170 (NCTC4674_00862) | - | 811013..811735 (+) | 723 | WP_012658292.1 | hypothetical protein | - |
| DQN33_RS04175 (NCTC4674_00863) | - | 811805..813907 (-) | 2103 | WP_111673181.1 | AAA family ATPase | - |
| DQN33_RS04180 (NCTC4674_00865) | rplJ | 814309..814809 (+) | 501 | WP_012658294.1 | 50S ribosomal protein L10 | - |
| DQN33_RS04185 (NCTC4674_00866) | rplL | 814875..815240 (+) | 366 | WP_012658295.1 | 50S ribosomal protein L7/L12 | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 45059.60 Da Isoelectric Point: 4.4892
>NTDB_id=1140507 DQN33_RS04160 WP_012658290.1 809021..810250(+) (clpX) [Streptococcus uberis strain NCTC4674]
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVLLSQEIIKEELAEEVLADLTEVPKPKELLDVLNQYVVGQDR
AKRALAVAVYNHYKRISFSESRDEEEVELQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISDDIQKFGLIPEFIGRLPVVAALEQLNIDDLIQI
LTVPKNALVKQYQALLSYDGVELSFDQDALEAIAAKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVVKVRITKESVNG
DAKPILETA
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVLLSQEIIKEELAEEVLADLTEVPKPKELLDVLNQYVVGQDR
AKRALAVAVYNHYKRISFSESRDEEEVELQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISDDIQKFGLIPEFIGRLPVVAALEQLNIDDLIQI
LTVPKNALVKQYQALLSYDGVELSFDQDALEAIAAKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVVKVRITKESVNG
DAKPILETA
Nucleotide
Download Length: 1230 bp
>NTDB_id=1140507 DQN33_RS04160 WP_012658290.1 809021..810250(+) (clpX) [Streptococcus uberis strain NCTC4674]
ATGGCAGGAAATAGAAGTACTGATATTAAGGTACATTGTTCATTTTGTGGTAAAAGCCAAGATGAAGTTAAAAAAATAAT
CGCAGGTAATAATGTTTTTATCTGTAATGAATGTGTTCTTTTATCACAAGAAATTATTAAAGAAGAGTTAGCAGAAGAAG
TCTTAGCTGATTTAACAGAAGTTCCAAAACCAAAGGAACTTTTAGATGTTTTAAACCAATATGTAGTCGGTCAGGACCGT
GCTAAAAGAGCATTGGCTGTTGCGGTTTACAATCATTATAAACGCATTTCATTTTCTGAAAGTCGTGATGAAGAGGAAGT
TGAATTGCAAAAATCAAACATCTTGATGATTGGGCCAACAGGATCTGGTAAGACCTTCTTAGCCCAAACCTTGGCAAAAA
GTTTAAATGTGCCTTTTGCCATTGCTGATGCAACATCATTAACAGAAGCAGGCTATGTCGGAGAAGATGTTGAAAATATT
TTGTTGAAACTTATCCAAGCTGCTGATTACAATGTTGAACGAGCAGAACGTGGTATTATTTACGTAGACGAAATAGACAA
AATTGCCAAAAAAGGTGAGAATGTCTCTATCACACGTGATGTATCAGGAGAAGGAGTTCAACAAGCCTTGTTGAAAATCA
TTGAAGGGACAGTTGCATCTGTTCCACCTCAAGGAGGCCGGAAACACCCTAATCAAGAGATGATTCAAATTGATACCAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGCATTGAAGAAATTGTCAAACAGCGATTGGGTGAAAAAATCATTGG
CTTTGGTCAAAATTCCCGTAAGATTGATGAAGATGCTTCTTATATGCAAGAAATCATTTCTGATGATATTCAAAAATTCG
GTCTTATACCAGAATTCATTGGTCGCCTACCAGTTGTAGCTGCTTTAGAACAGCTCAACATAGATGACCTCATTCAAATT
TTGACAGTTCCGAAAAATGCTTTGGTTAAACAATATCAAGCCCTATTGTCATATGATGGTGTTGAATTGTCATTTGATCA
AGATGCTTTAGAAGCTATTGCGGCGAAAGCTATTGAAAGAAAAACAGGTGCGCGTGGTTTACGTTCCATTATTGAAGAAA
CCATGTTAGATATTATGTTTGAAATTCCTAGTCAGGAAGATGTAGTCAAAGTACGTATTACCAAGGAATCTGTCAATGGT
GACGCAAAACCGATTTTAGAAACAGCGTAG
ATGGCAGGAAATAGAAGTACTGATATTAAGGTACATTGTTCATTTTGTGGTAAAAGCCAAGATGAAGTTAAAAAAATAAT
CGCAGGTAATAATGTTTTTATCTGTAATGAATGTGTTCTTTTATCACAAGAAATTATTAAAGAAGAGTTAGCAGAAGAAG
TCTTAGCTGATTTAACAGAAGTTCCAAAACCAAAGGAACTTTTAGATGTTTTAAACCAATATGTAGTCGGTCAGGACCGT
GCTAAAAGAGCATTGGCTGTTGCGGTTTACAATCATTATAAACGCATTTCATTTTCTGAAAGTCGTGATGAAGAGGAAGT
TGAATTGCAAAAATCAAACATCTTGATGATTGGGCCAACAGGATCTGGTAAGACCTTCTTAGCCCAAACCTTGGCAAAAA
GTTTAAATGTGCCTTTTGCCATTGCTGATGCAACATCATTAACAGAAGCAGGCTATGTCGGAGAAGATGTTGAAAATATT
TTGTTGAAACTTATCCAAGCTGCTGATTACAATGTTGAACGAGCAGAACGTGGTATTATTTACGTAGACGAAATAGACAA
AATTGCCAAAAAAGGTGAGAATGTCTCTATCACACGTGATGTATCAGGAGAAGGAGTTCAACAAGCCTTGTTGAAAATCA
TTGAAGGGACAGTTGCATCTGTTCCACCTCAAGGAGGCCGGAAACACCCTAATCAAGAGATGATTCAAATTGATACCAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGCATTGAAGAAATTGTCAAACAGCGATTGGGTGAAAAAATCATTGG
CTTTGGTCAAAATTCCCGTAAGATTGATGAAGATGCTTCTTATATGCAAGAAATCATTTCTGATGATATTCAAAAATTCG
GTCTTATACCAGAATTCATTGGTCGCCTACCAGTTGTAGCTGCTTTAGAACAGCTCAACATAGATGACCTCATTCAAATT
TTGACAGTTCCGAAAAATGCTTTGGTTAAACAATATCAAGCCCTATTGTCATATGATGGTGTTGAATTGTCATTTGATCA
AGATGCTTTAGAAGCTATTGCGGCGAAAGCTATTGAAAGAAAAACAGGTGCGCGTGGTTTACGTTCCATTATTGAAGAAA
CCATGTTAGATATTATGTTTGAAATTCCTAGTCAGGAAGATGTAGTCAAAGTACGTATTACCAAGGAATCTGTCAATGGT
GACGCAAAACCGATTTTAGAAACAGCGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
88.264 |
100 |
0.883 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.603 |
98.044 |
0.575 |