Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQN23_RS01260 Genome accession   NZ_LS483403
Coordinates   210614..211876 (+) Length   420 a.a.
NCBI ID   WP_020916081.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC13774     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 205614..216876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN23_RS01235 (NCTC13774_00248) galE 206464..207462 (+) 999 WP_020916077.1 UDP-glucose 4-epimerase GalE -
  DQN23_RS09640 (NCTC13774_00249) - 207542..207739 (+) 198 WP_348634458.1 hypothetical protein -
  DQN23_RS01240 (NCTC13774_00250) - 207720..208373 (+) 654 WP_373106536.1 GNAT family N-acetyltransferase -
  DQN23_RS01245 (NCTC13774_00251) yajC 208493..208822 (+) 330 WP_058813614.1 preprotein translocase subunit YajC -
  DQN23_RS01250 (NCTC13774_00252) - 208957..209712 (+) 756 WP_020916079.1 isoprenyl transferase -
  DQN23_RS01255 (NCTC13774_00253) - 209725..210519 (+) 795 WP_020916080.1 phosphatidate cytidylyltransferase -
  DQN23_RS01260 (NCTC13774_00254) eeP 210614..211876 (+) 1263 WP_020916081.1 RIP metalloprotease RseP Regulator
  DQN23_RS01265 (NCTC13774_00255) - 212038..213894 (+) 1857 WP_111712598.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45620.23 Da        Isoelectric Point: 7.5543

>NTDB_id=1140331 DQN23_RS01260 WP_020916081.1 210614..211876(+) (eeP) [Streptococcus lutetiensis strain NCTC13774]
MLGIITFIIVFGILVIVHEFGHLYFAKKAGILVREFSIGMGPKIFSHFDKEGTAYTFRILPLGGYVRMAGWGDDTTEIKT
GTPASLSLNKDGLVTRINLSHKQLDNTALPMNVTSYDLEDKLEITGLVLDEQKTYTVHHDATIVEEDGTEIRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGTLAFILLVFMQGGVPNPSTNAVRVTDGGAMQAAGVKDGDKVLAVGDYKVSNWSELTE
AVAKSTKGISKDTTIPVTVKDASGKTKTLDIKPVKNHGSYLIGVSSALKTGFWDKITGGFQMSWQSAMLILNALKGIVSN
FSLDKLGGPVAMYQASSQAASYGLTSVINLLALLSINLGIVNLIPIPALDGGKILMNLIEIVRRKPLKQETETYVTLVGV
VIMIILMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1140331 DQN23_RS01260 WP_020916081.1 210614..211876(+) (eeP) [Streptococcus lutetiensis strain NCTC13774]
ATGCTCGGAATTATAACGTTTATTATTGTTTTTGGGATCTTAGTTATTGTCCACGAATTTGGTCACCTATATTTTGCTAA
AAAAGCAGGTATCTTAGTGAGAGAATTTTCTATCGGGATGGGCCCGAAAATCTTTTCTCATTTTGATAAGGAAGGGACAG
CTTATACGTTTCGTATTCTTCCTTTAGGTGGTTATGTCCGTATGGCAGGCTGGGGTGATGATACCACTGAAATCAAGACG
GGTACACCAGCTAGCCTGAGTTTGAACAAAGACGGACTTGTGACACGTATTAATTTGTCACACAAACAGTTGGATAATAC
AGCTCTTCCTATGAATGTGACTTCTTATGATTTGGAAGATAAATTAGAAATCACAGGATTGGTTTTAGATGAGCAAAAGA
CATACACTGTTCATCACGATGCCACAATCGTTGAAGAAGATGGCACAGAGATTCGCATTGCGCCCCTTGATGTGCAGTAT
CAAAATGCTACTGTCTGGGGACGTTTGATGACAAACTTTGCTGGTCCGATGAATAATTTTATTCTAGGAACGCTAGCTTT
CATCTTACTTGTCTTTATGCAAGGTGGAGTCCCGAATCCCTCGACAAATGCTGTGCGAGTGACTGACGGTGGTGCCATGC
AAGCTGCAGGTGTCAAAGATGGTGACAAGGTATTGGCAGTCGGTGATTACAAAGTCTCAAATTGGTCTGAATTGACTGAG
GCTGTTGCCAAATCGACAAAAGGTATTTCAAAAGATACCACGATTCCTGTTACCGTAAAAGATGCTTCTGGAAAAACAAA
GACTCTTGATATTAAGCCAGTCAAAAATCATGGTAGCTATCTTATCGGAGTTTCTTCAGCTTTGAAAACAGGTTTCTGGG
ACAAGATTACTGGTGGCTTCCAAATGTCTTGGCAAAGTGCCATGTTAATTTTAAATGCTTTAAAAGGTATTGTGTCAAAT
TTCAGCTTGGATAAACTTGGTGGTCCCGTAGCTATGTATCAGGCGTCAAGTCAAGCAGCTTCCTATGGATTGACATCAGT
GATTAATCTGTTAGCTCTCTTGTCAATTAACCTTGGAATTGTTAACCTTATCCCGATTCCAGCTTTGGATGGTGGGAAAA
TCTTGATGAATCTTATCGAGATTGTTCGTCGTAAACCACTCAAACAAGAAACAGAAACTTATGTCACTCTAGTTGGTGTA
GTCATCATGATTATCTTGATGATTGCCGTTACTTGGAATGATATTATGCGAGTTTTCTTCTAA

Domains


Predicted by InterproScan.

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.19

100

0.662

  eeP Streptococcus thermophilus LMD-9

65.952

100

0.66


Multiple sequence alignment