Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQM79_RS08080 Genome accession   NZ_LS483401
Coordinates   1583020..1584279 (-) Length   419 a.a.
NCBI ID   WP_002988034.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10085     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578020..1589279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM79_RS08075 (NCTC10085_01595) - 1580966..1582822 (-) 1857 WP_002988037.1 proline--tRNA ligase -
  DQM79_RS08080 (NCTC10085_01596) eeP 1583020..1584279 (-) 1260 WP_002988034.1 RIP metalloprotease RseP Regulator
  DQM79_RS08085 (NCTC10085_01597) - 1584352..1585146 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  DQM79_RS08090 (NCTC10085_01598) - 1585159..1585908 (-) 750 WP_002988029.1 isoprenyl transferase -
  DQM79_RS08095 (NCTC10085_01599) yajC 1586127..1586492 (-) 366 WP_002988027.1 preprotein translocase subunit YajC -
  DQM79_RS08100 (NCTC10085_01600) - 1586608..1586982 (-) 375 WP_002988023.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45731.52 Da        Isoelectric Point: 9.2387

>NTDB_id=1140307 DQM79_RS08080 WP_002988034.1 1583020..1584279(-) (eeP) [Streptococcus pyogenes strain NCTC10085]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVDLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLIIGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1140307 DQM79_RS08080 WP_002988034.1 1583020..1584279(-) (eeP) [Streptococcus pyogenes strain NCTC10085]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCAGGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGCGGTTATGTGCGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTACAAGGTGACTAGCTGGAATGATCTTACTGAG
GCTGTAGACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCATTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(206-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

100

0.685
  eeP Streptococcus thermophilus LMD-9

68.095

100

0.683

Multiple sequence alignment