Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM95_RS01750 Genome accession   NZ_LS483397
Coordinates   296570..297829 (+) Length   419 a.a.
NCBI ID   WP_037593211.1    Uniprot ID   -
Organism   Streptococcus uberis strain NCTC3858     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 291570..302829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM95_RS01725 (NCTC3858_00352) galE 292939..293934 (+) 996 WP_037593202.1 UDP-glucose 4-epimerase GalE -
  DQM95_RS01730 (NCTC3858_00353) traF 294001..294357 (+) 357 WP_111685914.1 conjugal transfer protein TraF -
  DQM95_RS01735 (NCTC3858_00354) yajC 294433..294816 (+) 384 WP_037593206.1 preprotein translocase subunit YajC -
  DQM95_RS01740 (NCTC3858_00355) - 294980..295729 (+) 750 WP_037593209.1 isoprenyl transferase -
  DQM95_RS01745 (NCTC3858_00356) - 295741..296535 (+) 795 WP_012657802.1 phosphatidate cytidylyltransferase -
  DQM95_RS01750 (NCTC3858_00357) eeP 296570..297829 (+) 1260 WP_037593211.1 RIP metalloprotease RseP Regulator
  DQM95_RS01755 (NCTC3858_00358) - 297852..299708 (+) 1857 WP_037593212.1 proline--tRNA ligase -
  DQM95_RS01760 (NCTC3858_00359) - 299786..300343 (+) 558 WP_037593214.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45646.52 Da        Isoelectric Point: 8.0534

>NTDB_id=1140150 DQM95_RS01750 WP_037593211.1 296570..297829(+) (eeP) [Streptococcus uberis strain NCTC3858]
MLGLITFIIVFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKLYSHVDKEGTLYTIRSLPLGGYVRMAGWGDDSTEIKT
GTPASLSLDASGKVTRINLSQNRLDPNSLPMHVTAYDLEDKLTITGLVLEETKEFDVAHNATIVEEDGTEVRIAPLDVQY
QNASIWGRLITNFAGPMNNFILGLLVFIFLVFLQGGALDTNSNHIKVVDNGAAAKAGIKSDDQILQIENIPVSNWQELTG
AVASSTKDLKEGQSLTVKVKSQGKVKELFLKPQKVGGKFAIGVQCRLKTGFKDKLLGGFEMAINGALLIITALKNLMTGF
SLDKLGGPVAMYQMSSQAAASGIETVLSMMAMLSINLGIFNLIPIPALDGGKILMNLIEAIRRKPLKRETETYITFVGVV
IMLVLMVAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1140150 DQM95_RS01750 WP_037593211.1 296570..297829(+) (eeP) [Streptococcus uberis strain NCTC3858]
ATGTTAGGATTAATCACTTTTATCATTGTTTTTGGAATACTAGTCATTGTCCATGAATTTGGACATTTCTATTTTGCCAA
AAAATCAGGAATTCTTGTCAGAGAATTCGCCATCGGAATGGGGCCAAAGCTTTATTCTCATGTGGATAAAGAAGGAACTC
TTTACACCATCAGAAGTCTTCCTTTAGGAGGCTATGTTCGCATGGCAGGCTGGGGAGACGATAGTACAGAAATTAAGACA
GGGACGCCGGCTAGCCTAAGCTTAGATGCCTCAGGTAAGGTAACACGCATTAACCTGTCACAAAATCGACTAGATCCCAA
TAGTTTACCAATGCATGTGACGGCATATGATTTAGAAGATAAATTGACCATCACAGGACTGGTACTAGAGGAGACAAAAG
AGTTTGATGTGGCTCATAATGCTACAATAGTAGAGGAAGATGGCACCGAAGTTCGTATCGCACCACTTGATGTCCAATAT
CAAAACGCAAGTATTTGGGGAAGATTAATCACCAATTTTGCTGGTCCGATGAACAATTTCATTTTAGGCCTACTCGTCTT
TATCTTTTTGGTCTTTTTACAAGGCGGAGCTTTGGATACTAATAGTAACCATATTAAGGTTGTTGACAATGGCGCAGCTG
CCAAAGCAGGAATCAAAAGCGATGACCAGATCCTTCAGATAGAAAACATACCTGTCAGCAACTGGCAGGAATTGACAGGA
GCCGTAGCTAGCTCCACAAAAGACTTGAAAGAAGGTCAATCACTGACGGTTAAGGTGAAATCTCAAGGAAAAGTCAAAGA
ACTATTCTTGAAACCACAAAAAGTTGGTGGCAAATTCGCTATCGGTGTTCAATGCCGCTTAAAAACCGGCTTTAAAGATA
AACTTTTGGGTGGTTTTGAAATGGCCATTAATGGAGCGCTTTTAATCATAACGGCCTTGAAAAATTTAATGACTGGTTTT
AGTCTAGATAAATTAGGCGGCCCTGTTGCCATGTATCAAATGTCATCACAGGCTGCAGCAAGCGGCATTGAGACAGTCTT
GTCCATGATGGCCATGCTATCTATCAATCTAGGGATTTTCAACTTAATTCCTATCCCTGCTTTAGATGGTGGAAAAATAC
TAATGAATCTGATTGAAGCCATCCGCAGAAAACCTTTAAAAAGGGAAACCGAAACCTATATCACCTTTGTAGGTGTTGTC
ATTATGTTAGTCTTAATGGTCGCAGTTACTTGGAATGATATCATGCGCGCTTTTTTCTAA

Domains


Predicted by InterproScan.

(205-268)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.476

100

0.656

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654


Multiple sequence alignment