Detailed information NTG1139817

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DQM45_RS09075
• Genome accession: NZ_LS483388
• Coordinates: 1816381..1817427 (-)
• Length: 348 a.a.
• NCBI ID: WP_003083752.1
• Uniprot ID: A0A7W0AS78
• Organism: Streptococcus porcinus strain NCTC10999
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1811381..1822427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM45_RS09050 (NCTC10999_01839)	rimI	1812078..1812506 (-)	429	WP_003083288.1	ribosomal protein S18-alanine N-acetyltransferase	-
DQM45_RS09055 (NCTC10999_01840)	tsaB	1812506..1813198 (-)	693	WP_003083824.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
DQM45_RS09060 (NCTC10999_01841)	-	1813477..1813707 (+)	231	WP_003085221.1	DNA-dependent RNA polymerase subunit epsilon	-
DQM45_RS09065 (NCTC10999_01842)	rnjA	1813709..1815394 (+)	1686	WP_003086075.1	ribonuclease J1	-
DQM45_RS09070 (NCTC10999_01843)	amiF	1815446..1816381 (-)	936	WP_003083860.1	ABC transporter ATP-binding protein	Regulator
DQM45_RS09075 (NCTC10999_01844)	oppD	1816381..1817427 (-)	1047	WP_003083752.1	ABC transporter ATP-binding protein	Regulator
DQM45_RS09080 (NCTC10999_01845)	-	1817438..1818469 (-)	1032	WP_003085327.1	ABC transporter permease	-
DQM45_RS09085 (NCTC10999_01846)	-	1818479..1819393 (-)	915	WP_003083822.1	ABC transporter permease	-
DQM45_RS09090 (NCTC10999_01847)	-	1819465..1821123 (-)	1659	WP_003083189.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38469.12 Da
• Isoelectric Point: 5.8513

>NTDB_id=1139817 DQM45_RS09075 WP_003083752.1 1816381..1817427(-) (oppD) [Streptococcus porcinus strain NCTC10999]
MSNETILNVKNLHVDFKTYAGDVKAIRDINFELYKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDIDFKGKKLNNL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGKQIAEAILIHESVSKKEALDRALKLMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLKSMPTTDTEAGTLESIPGTPPDLLNPPKGDAFAARNEFALDIDHEEEPPMFKVSDTHFAATWLL
DERAPKVIPPVQIQKRWKKWAEKNGGQA

Nucleotide

• Length: 1047 bp

>NTDB_id=1139817 DQM45_RS09075 WP_003083752.1 1816381..1817427(-) (oppD) [Streptococcus porcinus strain NCTC10999]
ATGTCAAATGAAACAATCTTAAATGTTAAAAACCTCCACGTTGATTTCAAAACTTATGCTGGAGATGTTAAAGCTATCCG
AGATATCAATTTCGAATTGTATAAGGGTGAGACCTTGGCAATCGTCGGTGAATCTGGATCAGGAAAGTCAGTGACTACCC
GGACCTTAATGGGGTTGAATGCAAAAAATGCAAGTATTTCAGGTGATATTGACTTTAAAGGAAAAAAACTCAATAACTTA
AAAGAGGAAGAATGGGTTAAAGTTCGTGGAAAAGAAATTGCCATGATTTTCCAAGATCCAATGACTAGTTTGGATCCTAC
CATGAAAATTGGTAAGCAAATTGCTGAAGCGATTCTAATCCATGAGTCAGTATCTAAGAAAGAAGCCTTAGATCGTGCTT
TGAAATTGATGCATCAAGTAGGTATTCCTAATGCTGAAGAGCACATCAATGACTATCCTCACCAGTGGTCGGGTGGTATG
CGACAACGGGCCGTTATTGCTATCGCCTTAGCAGCTAATCCGGAGATATTGATTGCTGATGAACCAACAACTGCCCTTGA
TGTTACTATTCAAAATCAAATTTTGAAATTAATGAAAGGCTTGCAGTCGCAAATTTCATCATCTATTATCTTTATTACTC
ATGACTTAGGAGTTGTTGCAGGTATGGCGGATCGTGTTGCGGTTATGTATGCTGGAAAAATTGTTGAATATGGTACAGTT
GATGAAGTCTTCTACAATCCACAGCATCCCTATACTTGGGGCCTCTTAAAATCAATGCCGACAACAGATACAGAAGCTGG
TACTTTAGAATCAATTCCAGGTACACCACCGGACTTACTAAATCCACCAAAAGGTGATGCTTTTGCAGCTCGTAACGAAT
TTGCTTTAGACATTGACCATGAAGAAGAACCTCCAATGTTTAAAGTTAGTGACACGCATTTTGCTGCTACTTGGCTGTTA
GATGAGCGTGCACCAAAAGTTATTCCTCCAGTTCAAATACAAAAACGTTGGAAGAAATGGGCTGAAAAGAACGGAGGTCA
AGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: A0A7W0AS78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	78.841	99.138	0.782
amiE	Streptococcus salivarius strain HSISS4	56.083	96.839	0.543
amiE	Streptococcus thermophilus LMG 18311	55.786	96.839	0.54
amiE	Streptococcus thermophilus LMD-9	55.786	96.839	0.54