Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | DQM45_RS05780 | Genome accession | NZ_LS483388 |
| Coordinates | 1155815..1157044 (-) | Length | 409 a.a. |
| NCBI ID | WP_003086008.1 | Uniprot ID | A0A4V0H838 |
| Organism | Streptococcus porcinus strain NCTC10999 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1150815..1162044
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM45_RS05760 (NCTC10999_01171) | rplJ | 1151150..1151650 (-) | 501 | WP_003083012.1 | 50S ribosomal protein L10 | - |
| DQM45_RS05765 (NCTC10999_01173) | - | 1152059..1154158 (+) | 2100 | WP_003085631.1 | AAA family ATPase | - |
| DQM45_RS05770 (NCTC10999_01174) | - | 1154385..1155101 (-) | 717 | WP_003083334.1 | hypothetical protein | - |
| DQM45_RS05775 (NCTC10999_01175) | yihA | 1155203..1155802 (-) | 600 | WP_003085441.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DQM45_RS05780 (NCTC10999_01176) | clpX | 1155815..1157044 (-) | 1230 | WP_003086008.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| DQM45_RS05785 (NCTC10999_01177) | - | 1157076..1157246 (-) | 171 | WP_003083300.1 | hypothetical protein | - |
| DQM45_RS05790 (NCTC10999_01178) | - | 1157270..1157767 (-) | 498 | WP_003084418.1 | dihydrofolate reductase | - |
| DQM45_RS05795 (NCTC10999_01179) | - | 1157846..1158685 (-) | 840 | WP_003085382.1 | thymidylate synthase | - |
| DQM45_RS05800 (NCTC10999_01180) | - | 1158885..1160057 (+) | 1173 | WP_003083770.1 | hydroxymethylglutaryl-CoA synthase | - |
| DQM45_RS05805 (NCTC10999_01181) | - | 1160047..1161324 (+) | 1278 | WP_003085843.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 44970.41 Da Isoelectric Point: 4.4921
>NTDB_id=1139796 DQM45_RS05780 WP_003086008.1 1155815..1157044(-) (clpX) [Streptococcus porcinus strain NCTC10999]
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALSVAVYNHYKRVSFAESRDDEEVELQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLSTSDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
TAKPILEIA
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALSVAVYNHYKRVSFAESRDDEEVELQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLSTSDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
TAKPILEIA
Nucleotide
Download Length: 1230 bp
>NTDB_id=1139796 DQM45_RS05780 WP_003086008.1 1155815..1157044(-) (clpX) [Streptococcus porcinus strain NCTC10999]
ATGGCGGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGCAAGAGCCAGGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTCTTTATATGTAATGAATGTGTTGCCCTGTCACAAGAAATTATTAAAGAAGAATTAGCTGAGGAAG
TATTAGCTGATTTGACAGAAGTTCCTAAACCAAAAGAATTATTAGAGACACTAAACCAATATGTGGTTGGTCAAGATCGT
GCAAAAAGAGCTTTGTCGGTAGCTGTTTATAACCATTACAAACGGGTTTCTTTTGCAGAAAGTCGCGATGATGAAGAAGT
GGAACTACAAAAATCAAATATTTTAATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTAGCTCAAACATTAGCTAAAA
CCTTAAATGTTCCTTTTGCAATTGCAGATGCTACCTCCTTGACTGAGGCTGGTTACGTGGGTGAGGATGTTGAAAACATT
TTATTGAAACTGATTCAGGCAGCAGACTATAATGTTGAGCGCGCTGAACGTGGTATCATCTATGTTGATGAGATTGATAA
AATTGCTAAAAAAGGTGAAAACGTGTCAATTACCCGTGATGTATCAGGAGAAGGAGTTCAGCAAGCCCTCTTGAAAATTA
TTGAAGGAACTGTTGCTTCTGTTCCTCCGCAAGGTGGCCGTAAACACCCTAACCAAGAAATGATACAGATTGACACTAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGTATTGAAGAGATTGTTAAACAAAGATTGGGAGAAAAAATTATTGG
TTTTGGACAAAACAGTCGCAAAATTGATGAAGATGCCTCCTATATGCAAGAAATTATTTCTGAGGATATCCAAACCTTTG
GTTTAATTCCGGAGTTCATTGGAAGATTACCAGTTGTTGCAGCCTTAGAACAGCTTAGCACCAGTGATTTAGTAAAAATA
CTGACCGAGCCAAAGAATGCTCTTGTCAAACAATATCAAACCTTACTATCTTACGATGGTGTGGAACTGACTTTTGATCA
AGAAGCTTTAGATGCAATTGCTGAAAAAGCGATTGCTCGTAAAACTGGTGCTCGTGGATTACGTTCAATCATTGAAGAGA
CAATGTTAGATCTTATGTTTGAAATCCCTAGCCAAGAAGATGTGACCAAAGTACGTATTACAAAAGATGCTGTTGATGGG
ACTGCAAAACCAATCTTGGAAATAGCTTAA
ATGGCGGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGCAAGAGCCAGGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTCTTTATATGTAATGAATGTGTTGCCCTGTCACAAGAAATTATTAAAGAAGAATTAGCTGAGGAAG
TATTAGCTGATTTGACAGAAGTTCCTAAACCAAAAGAATTATTAGAGACACTAAACCAATATGTGGTTGGTCAAGATCGT
GCAAAAAGAGCTTTGTCGGTAGCTGTTTATAACCATTACAAACGGGTTTCTTTTGCAGAAAGTCGCGATGATGAAGAAGT
GGAACTACAAAAATCAAATATTTTAATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTAGCTCAAACATTAGCTAAAA
CCTTAAATGTTCCTTTTGCAATTGCAGATGCTACCTCCTTGACTGAGGCTGGTTACGTGGGTGAGGATGTTGAAAACATT
TTATTGAAACTGATTCAGGCAGCAGACTATAATGTTGAGCGCGCTGAACGTGGTATCATCTATGTTGATGAGATTGATAA
AATTGCTAAAAAAGGTGAAAACGTGTCAATTACCCGTGATGTATCAGGAGAAGGAGTTCAGCAAGCCCTCTTGAAAATTA
TTGAAGGAACTGTTGCTTCTGTTCCTCCGCAAGGTGGCCGTAAACACCCTAACCAAGAAATGATACAGATTGACACTAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGTATTGAAGAGATTGTTAAACAAAGATTGGGAGAAAAAATTATTGG
TTTTGGACAAAACAGTCGCAAAATTGATGAAGATGCCTCCTATATGCAAGAAATTATTTCTGAGGATATCCAAACCTTTG
GTTTAATTCCGGAGTTCATTGGAAGATTACCAGTTGTTGCAGCCTTAGAACAGCTTAGCACCAGTGATTTAGTAAAAATA
CTGACCGAGCCAAAGAATGCTCTTGTCAAACAATATCAAACCTTACTATCTTACGATGGTGTGGAACTGACTTTTGATCA
AGAAGCTTTAGATGCAATTGCTGAAAAAGCGATTGCTCGTAAAACTGGTGCTCGTGGATTACGTTCAATCATTGAAGAGA
CAATGTTAGATCTTATGTTTGAAATCCCTAGCCAAGAAGATGTGACCAAAGTACGTATTACAAAAGATGCTGTTGATGGG
ACTGCAAAACCAATCTTGGAAATAGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
89.242 |
100 |
0.892 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.102 |
98.044 |
0.579 |