Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DQM64_RS02260 | Genome accession | NZ_LS483387 |
| Coordinates | 384813..385847 (+) | Length | 344 a.a. |
| NCBI ID | WP_000732713.1 | Uniprot ID | A0AAV3JGP6 |
| Organism | Streptococcus agalactiae strain NCTC8187 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 379813..390847
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM64_RS02220 (NCTC8187_00431) | tsaE | 379889..380332 (+) | 444 | WP_000500161.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| DQM64_RS02225 (NCTC8187_00432) | - | 380325..380846 (+) | 522 | WP_000043146.1 | GNAT family N-acetyltransferase | - |
| DQM64_RS02230 (NCTC8187_00433) | - | 380855..382162 (+) | 1308 | WP_111695094.1 | LCP family protein | - |
| DQM64_RS02235 (NCTC8187_00434) | - | 382226..382522 (-) | 297 | WP_000690175.1 | hypothetical protein | - |
| DQM64_RS02240 (NCTC8187_00435) | - | 382519..382938 (-) | 420 | WP_000368097.1 | HIT family protein | - |
| DQM64_RS02245 (NCTC8187_00436) | - | 383274..383777 (+) | 504 | WP_000773453.1 | hypothetical protein | - |
| DQM64_RS02250 (NCTC8187_00437) | - | 383829..384014 (-) | 186 | WP_000368100.1 | hypothetical protein | - |
| DQM64_RS02255 (NCTC8187_00438) | pptA | 384086..384811 (+) | 726 | WP_000912307.1 | ABC transporter ATP-binding protein | Regulator |
| DQM64_RS02260 (NCTC8187_00439) | pptB | 384813..385847 (+) | 1035 | WP_000732713.1 | ABC transporter permease | Regulator |
| DQM64_RS02265 (NCTC8187_00440) | - | 385905..386705 (+) | 801 | WP_000155919.1 | phosphotransferase family protein | - |
| DQM64_RS02270 (NCTC8187_00441) | trmB | 386695..387330 (+) | 636 | WP_001266024.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DQM64_RS02280 (NCTC8187_00443) | rimP | 387820..388296 (+) | 477 | WP_041971671.1 | ribosome maturation factor RimP | - |
| DQM64_RS02285 (NCTC8187_00444) | nusA | 388332..389483 (+) | 1152 | WP_000032295.1 | transcription termination factor NusA | - |
| DQM64_RS02290 (NCTC8187_00445) | - | 389505..389801 (+) | 297 | WP_001140526.1 | YlxR family protein | - |
| DQM64_RS02295 (NCTC8187_00446) | - | 389794..390096 (+) | 303 | WP_001065560.1 | YlxQ-related RNA-binding protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 40206.54 Da Isoelectric Point: 10.4988
>NTDB_id=1139740 DQM64_RS02260 WP_000732713.1 384813..385847(+) (pptB) [Streptococcus agalactiae strain NCTC8187]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID
Nucleotide
Download Length: 1035 bp
>NTDB_id=1139740 DQM64_RS02260 WP_000732713.1 384813..385847(+) (pptB) [Streptococcus agalactiae strain NCTC8187]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
48.547 |
100 |
0.485 |
| pptB | Streptococcus salivarius strain HSISS4 |
48.256 |
100 |
0.483 |