Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | DQM63_RS05345 | Genome accession | NZ_LS483385 |
| Coordinates | 1092074..1093303 (+) | Length | 409 a.a. |
| NCBI ID | WP_002895582.1 | Uniprot ID | A0A3R9G2C7 |
| Organism | Streptococcus sanguinis strain NCTC7863 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1087074..1098303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM63_RS05310 (NCTC7863_01044) | - | 1088128..1088715 (+) | 588 | WP_002913596.1 | hypothetical protein | - |
| DQM63_RS05315 (NCTC7863_01045) | - | 1088787..1089197 (+) | 411 | WP_002900432.1 | GNAT family N-acetyltransferase | - |
| DQM63_RS05325 (NCTC7863_01046) | - | 1089310..1090269 (+) | 960 | WP_002900431.1 | ROK family glucokinase | - |
| DQM63_RS05330 (NCTC7863_01047) | - | 1090373..1091212 (+) | 840 | WP_002913595.1 | thymidylate synthase | - |
| DQM63_RS05335 (NCTC7863_01048) | - | 1091337..1091849 (+) | 513 | WP_002913593.1 | dihydrofolate reductase | - |
| DQM63_RS05345 (NCTC7863_01050) | clpX | 1092074..1093303 (+) | 1230 | WP_002895582.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| DQM63_RS05350 (NCTC7863_01051) | yihA | 1093314..1093901 (+) | 588 | WP_002900427.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DQM63_RS05355 (NCTC7863_01052) | - | 1094049..1094747 (+) | 699 | WP_002900426.1 | glucosaminidase domain-containing protein | - |
| DQM63_RS05360 (NCTC7863_01053) | - | 1094882..1096291 (+) | 1410 | WP_002900425.1 | amino acid permease | - |
| DQM63_RS05365 (NCTC7863_01054) | mmuM | 1096301..1097248 (+) | 948 | WP_002900424.1 | homocysteine S-methyltransferase | - |
| DQM63_RS05370 (NCTC7863_01055) | - | 1097363..1098160 (+) | 798 | WP_002897632.1 | formate/nitrite transporter family protein | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 45617.05 Da Isoelectric Point: 4.3984
>NTDB_id=1139633 DQM63_RS05345 WP_002895582.1 1092074..1093303(+) (clpX) [Streptococcus sanguinis strain NCTC7863]
MPTSRNDDMMVFCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINYHDSREEEDVELQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVENI
LLKLLQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEDSSYMQEIISEDVQKFGIIPELIGRLPVFAALEQLTVDDLVRI
LKEPRNALIKQYQALLSYDDVKLEFDEDALQEIANKAIERKTGARGLRSIIEETMMDVMFEVPSQENVKLVRITKEAVDG
TDKPILETA
MPTSRNDDMMVFCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINYHDSREEEDVELQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVENI
LLKLLQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEDSSYMQEIISEDVQKFGIIPELIGRLPVFAALEQLTVDDLVRI
LKEPRNALIKQYQALLSYDDVKLEFDEDALQEIANKAIERKTGARGLRSIIEETMMDVMFEVPSQENVKLVRITKEAVDG
TDKPILETA
Nucleotide
Download Length: 1230 bp
>NTDB_id=1139633 DQM63_RS05345 WP_002895582.1 1092074..1093303(+) (clpX) [Streptococcus sanguinis strain NCTC7863]
ATGCCTACAAGTCGTAATGATGATATGATGGTTTTTTGTTCTTTCTGTGGGAAGAATCAAGATGAGGTGCAGAAGATTAT
AGCTGGAAATAATGCCTTCATCTGTAATGAATGTGTGGAGCTGGCACAGGAGATCATCCGTGAAGAGCTAGCCGAGGAAG
TGCTGGCAGATTTATCTGAGGTACCAAAACCTCAGGAGCTGCTGAATATCTTGAACCACTATGTTATCGGGCAAGACCGA
GCTAAGCGTGCCTTAGCAGTAGCGGTCTATAATCACTACAAGCGTATTAACTACCACGACAGCCGTGAAGAAGAAGATGT
GGAACTGCAAAAGTCAAATATTTTGATGATTGGTCCGACTGGGTCAGGTAAGACCTTCCTGGCGCAGACTCTGGCTCGCA
GCCTCAATGTGCCTTTCGCCATTGCGGACGCAACAGCTTTGACTGAAGCTGGTTATGTCGGAGAAGATGTTGAAAATATC
CTTCTCAAGCTTTTGCAGGCGGCTGACTTTAATATCGAGCGTGCTGAGCGCGGGATTATCTATGTCGATGAGATTGACAA
GATTGCTAAGAAAGGCGAAAATGTCTCTATCACCCGTGATGTTTCGGGTGAAGGAGTTCAGCAAGCTCTGCTGAAGATTA
TCGAAGGAACAGTAGCTAGTGTACCGCCGCAAGGTGGACGCAAGCATCCGCAGCAGGAAATGATTCAAGTAGATACCAAG
AATATTCTCTTCATTGTTGGCGGTGCTTTTGACGGTATCGAAGAAATCGTAAAACAGCGTCTGGGTGAGAAAATCATTGG
TTTCGGTCAGAACAACCGAGCAATCGACGAAGATAGTTCCTATATGCAGGAAATTATCTCAGAAGACGTCCAAAAGTTCG
GGATTATCCCAGAGTTGATTGGTCGTTTGCCTGTTTTTGCTGCTCTGGAGCAACTAACAGTTGATGATTTGGTTCGGATT
TTGAAAGAGCCTAGAAACGCCCTTATTAAGCAGTATCAGGCACTTCTGTCTTATGATGATGTTAAGCTTGAATTTGACGA
AGATGCTCTGCAGGAGATTGCCAATAAAGCGATTGAACGTAAAACAGGTGCACGAGGGCTTCGCTCTATCATTGAAGAAA
CTATGATGGATGTCATGTTTGAAGTTCCAAGTCAGGAAAATGTCAAACTTGTCCGCATTACCAAAGAAGCAGTAGATGGA
ACAGATAAGCCTATTCTAGAAACTGCCTAA
ATGCCTACAAGTCGTAATGATGATATGATGGTTTTTTGTTCTTTCTGTGGGAAGAATCAAGATGAGGTGCAGAAGATTAT
AGCTGGAAATAATGCCTTCATCTGTAATGAATGTGTGGAGCTGGCACAGGAGATCATCCGTGAAGAGCTAGCCGAGGAAG
TGCTGGCAGATTTATCTGAGGTACCAAAACCTCAGGAGCTGCTGAATATCTTGAACCACTATGTTATCGGGCAAGACCGA
GCTAAGCGTGCCTTAGCAGTAGCGGTCTATAATCACTACAAGCGTATTAACTACCACGACAGCCGTGAAGAAGAAGATGT
GGAACTGCAAAAGTCAAATATTTTGATGATTGGTCCGACTGGGTCAGGTAAGACCTTCCTGGCGCAGACTCTGGCTCGCA
GCCTCAATGTGCCTTTCGCCATTGCGGACGCAACAGCTTTGACTGAAGCTGGTTATGTCGGAGAAGATGTTGAAAATATC
CTTCTCAAGCTTTTGCAGGCGGCTGACTTTAATATCGAGCGTGCTGAGCGCGGGATTATCTATGTCGATGAGATTGACAA
GATTGCTAAGAAAGGCGAAAATGTCTCTATCACCCGTGATGTTTCGGGTGAAGGAGTTCAGCAAGCTCTGCTGAAGATTA
TCGAAGGAACAGTAGCTAGTGTACCGCCGCAAGGTGGACGCAAGCATCCGCAGCAGGAAATGATTCAAGTAGATACCAAG
AATATTCTCTTCATTGTTGGCGGTGCTTTTGACGGTATCGAAGAAATCGTAAAACAGCGTCTGGGTGAGAAAATCATTGG
TTTCGGTCAGAACAACCGAGCAATCGACGAAGATAGTTCCTATATGCAGGAAATTATCTCAGAAGACGTCCAAAAGTTCG
GGATTATCCCAGAGTTGATTGGTCGTTTGCCTGTTTTTGCTGCTCTGGAGCAACTAACAGTTGATGATTTGGTTCGGATT
TTGAAAGAGCCTAGAAACGCCCTTATTAAGCAGTATCAGGCACTTCTGTCTTATGATGATGTTAAGCTTGAATTTGACGA
AGATGCTCTGCAGGAGATTGCCAATAAAGCGATTGAACGTAAAACAGGTGCACGAGGGCTTCGCTCTATCATTGAAGAAA
CTATGATGGATGTCATGTTTGAAGTTCCAAGTCAGGAAAATGTCAAACTTGTCCGCATTACCAAAGAAGCAGTAGATGGA
ACAGATAAGCCTATTCTAGAAACTGCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
85.819 |
100 |
0.858 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.606 |
98.044 |
0.565 |