Detailed information NTG1139616

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM63_RS02135
• Genome accession: NZ_LS483385
• Coordinates: 408817..409743 (+)
• Length: 308 a.a.
• NCBI ID: WP_002901220.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain NCTC7863
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 403817..414743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM63_RS02120 (NCTC7863_00413)	amiC	405308..406804 (+)	1497	WP_002913957.1	ABC transporter permease	Regulator
DQM63_RS02125 (NCTC7863_00414)	amiD	406804..407730 (+)	927	WP_002898857.1	oligopeptide ABC transporter permease OppC	Regulator
DQM63_RS02130 (NCTC7863_00415)	amiE	407739..408806 (+)	1068	WP_002902455.1	ABC transporter ATP-binding protein	Regulator
DQM63_RS02135 (NCTC7863_00416)	amiF	408817..409743 (+)	927	WP_002901220.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34854.83 Da
• Isoelectric Point: 5.9009

>NTDB_id=1139616 DQM63_RS02135 WP_002901220.1 408817..409743(+) (amiF) [Streptococcus sanguinis strain NCTC7863]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDIFYEGKKINGKKSKA
EEADLIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFDSEEDRQRKVKNIINEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPVHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSVDKPEMAEIRPGHYVWANKAELEKYKQEQE

Nucleotide

• Length: 927 bp

>NTDB_id=1139616 DQM63_RS02135 WP_002901220.1 408817..409743(+) (amiF) [Streptococcus sanguinis strain NCTC7863]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGCGAAGGAAGTAAGAAATTTGTAGCAGTAAAAAA
CGCAAATTTCTTCATCAACAAGGGGGAAACTTTCTCTCTTGTAGGAGAATCAGGCTCTGGTAAGACTACTATTGGTCGAG
CTATTATCGGCCTTAATGATACCAGTGCAGGTGATATCTTCTACGAAGGCAAAAAGATTAATGGTAAAAAGTCAAAAGCA
GAAGAAGCAGACTTGATTCGCAAGATTCAGATGATTTTCCAAGATCCGGCTGCCAGTCTGAATGAACGTGCAACGGTTGA
CTATATCATATCTGAGGGGCTCTATAATTACCATTTGTTTGATAGTGAAGAAGACCGCCAAAGAAAAGTCAAAAATATCA
TCAATGAAGTTGGTTTGTTGGCTGAGCATTTAACTCGCTATCCTCACGAATTCTCTGGTGGACAGCGTCAGCGGATTGGG
ATTGCTCGTGCTCTGGTCATGCAACCAGACTTCGTAATTGCAGATGAGCCGATTTCTGCCTTGGACGTATCTGTTCGGGC
TCAGGTTTTGAATCTTTTGAAAAAATTTCAAAAAGAGCTTGGCTTGACCTACCTGTTTATTGCCCATGACCTTTCGGTAG
TTCGTTTTATTTCTGATCGTATCGCCGTGATTTACAAAGGTGTCATTGTAGAAGTGGCAGAGACAGAGGAGCTGTTCAAC
CATCCTGTCCACCCTTATACACAATCTTTGCTCTCAGCTGTTCCAATTCCAGACCCAATCTTGGAGCGTAAAAAAGTGTT
GAAGGTCTATGATCCTGACCAGCACGATTATTCAGTTGATAAACCAGAAATGGCAGAGATTCGTCCAGGACATTATGTCT
GGGCTAATAAAGCTGAACTCGAAAAGTATAAACAAGAACAAGAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	85.668	99.675	0.854
amiF	Streptococcus thermophilus LMG 18311	85.016	99.675	0.847
amiF	Streptococcus thermophilus LMD-9	84.691	99.675	0.844