Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DQM87_RS09830 Genome accession   NZ_LS483384
Coordinates   54154..54249 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13743     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49154..59249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM87_RS09755 - 50035..51364 (+) 1330 Protein_30 hypothetical protein -
  DQM87_RS00330 (NCTC13743_00066) purB 51733..53025 (+) 1293 WP_023612104.1 adenylosuccinate lyase -
  DQM87_RS00335 (NCTC13743_00067) comR 53159..54070 (+) 912 WP_023611326.1 transcriptional regulator Rgg4/ComR Regulator
  DQM87_RS09830 (NCTC13743_00068) comS 54154..54249 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  DQM87_RS00340 (NCTC13743_00069) ruvB 54296..55294 (+) 999 WP_063629365.1 Holliday junction branch migration DNA helicase RuvB -
  DQM87_RS00345 (NCTC13743_00070) - 55432..55869 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  DQM87_RS00350 (NCTC13743_00071) - 55892..56293 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  DQM87_RS00355 (NCTC13743_00072) - 56290..58065 (+) 1776 WP_021733211.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1139601 DQM87_RS09830 WP_198462994.1 54154..54249(+) (comS) [Streptococcus pyogenes strain NCTC13743]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1139601 DQM87_RS09830 WP_198462994.1 54154..54249(+) (comS) [Streptococcus pyogenes strain NCTC13743]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment