Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | DQM69_RS00505 | Genome accession | NZ_LS483381 |
| Coordinates | 83515..84138 (+) | Length | 207 a.a. |
| NCBI ID | WP_002962720.1 | Uniprot ID | U2IUC9 |
| Organism | Streptococcus sobrinus strain NCTC10921 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 78515..89138
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM69_RS00505 (NCTC10921_00101) | comX | 83515..84138 (+) | 624 | WP_002962720.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| DQM69_RS00510 (NCTC10921_00102) | rplM | 84435..84881 (+) | 447 | WP_002962718.1 | 50S ribosomal protein L13 | - |
| DQM69_RS00515 (NCTC10921_00103) | rpsI | 84901..85293 (+) | 393 | WP_019775615.1 | 30S ribosomal protein S9 | - |
| DQM69_RS00520 (NCTC10921_00104) | ruvB | 85567..86565 (+) | 999 | WP_019769254.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DQM69_RS00525 (NCTC10921_00105) | - | 86610..87035 (+) | 426 | WP_002962714.1 | low molecular weight protein-tyrosine-phosphatase | - |
| DQM69_RS00530 (NCTC10921_00106) | - | 87014..87448 (+) | 435 | WP_002962711.1 | MORN repeat-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 24561.19 Da Isoelectric Point: 4.8066
>NTDB_id=1139372 DQM69_RS00505 WP_002962720.1 83515..84138(+) (comX) [Streptococcus sobrinus strain NCTC10921]
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
Nucleotide
Download Length: 624 bp
>NTDB_id=1139372 DQM69_RS00505 WP_002962720.1 83515..84138(+) (comX) [Streptococcus sobrinus strain NCTC10921]
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Streptococcus sobrinus strain NIDR 6715-7 |
100 |
100 |
1 |