Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM75_RS08965 Genome accession   NZ_LS483380
Coordinates   1877503..1878768 (-) Length   421 a.a.
NCBI ID   WP_043052370.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC11824     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1872503..1883768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM75_RS08955 (NCTC11824_01801) - 1874768..1875325 (-) 558 WP_043041145.1 nucleotidyltransferase family protein -
  DQM75_RS08960 (NCTC11824_01802) - 1875377..1877233 (-) 1857 WP_111692794.1 proline--tRNA ligase -
  DQM75_RS08965 (NCTC11824_01803) eeP 1877503..1878768 (-) 1266 WP_043052370.1 RIP metalloprotease RseP Regulator
  DQM75_RS08970 (NCTC11824_01804) - 1878800..1879594 (-) 795 WP_012677326.1 phosphatidate cytidylyltransferase -
  DQM75_RS08975 (NCTC11824_01805) - 1879604..1880353 (-) 750 WP_012677325.1 isoprenyl transferase -
  DQM75_RS08980 (NCTC11824_01806) yajC 1880527..1880886 (-) 360 WP_012516346.1 preprotein translocase subunit YajC -
  DQM75_RS08985 (NCTC11824_01807) traF 1881000..1881362 (-) 363 WP_012677324.1 conjugal transfer protein TraF -
  DQM75_RS08995 (NCTC11824_01808) - 1881471..1883090 (-) 1620 WP_111692796.1 glycoside hydrolase family 13 protein -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45956.43 Da        Isoelectric Point: 5.9240

>NTDB_id=1139362 DQM75_RS08965 WP_043052370.1 1877503..1878768(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
MLGIITFIIIFGILVIVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQGKLDPTSLPMNVTAYDLEDKLTITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=1139362 DQM75_RS08965 WP_043052370.1 1877503..1878768(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGATTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACAACTGAGATAAAAACA
GGAACGCCTGCTAGCTTGACGCTCAATGACCAAGGTCTGGTCAAGCGGATTAATCTATCTCAGGGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGACCAAGA
CCTATTCGGTAGATCATGATGCTACCATTGTCGAGGAGGATGGTACAGAGATCCGGATTGCACCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCGCTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

99.762

0.682

  eeP Streptococcus thermophilus LMD-9

68.095

99.762

0.679


Multiple sequence alignment