Detailed information NTG1139321

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DQM75_RS01590
• Genome accession: NZ_LS483380
• Coordinates: 303274..304320 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678544.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11824
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 298274..309320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM75_RS01575 (NCTC11824_00314)	-	299481..301139 (+)	1659	WP_043030442.1	peptide ABC transporter substrate-binding protein	-
DQM75_RS01580 (NCTC11824_00315)	-	301306..302220 (+)	915	WP_012514937.1	ABC transporter permease	-
DQM75_RS01585 (NCTC11824_00316)	-	302230..303261 (+)	1032	WP_012678545.1	ABC transporter permease	-
DQM75_RS01590 (NCTC11824_00317)	oppD	303274..304320 (+)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
DQM75_RS01595 (NCTC11824_00318)	amiF	304320..305255 (+)	936	WP_111692166.1	ABC transporter ATP-binding protein	Regulator
DQM75_RS01600 (NCTC11824_00319)	rnjA	305886..307568 (-)	1683	WP_043025155.1	ribonuclease J1	-
DQM75_RS01605 (NCTC11824_00320)	-	307570..307800 (-)	231	WP_012678542.1	DNA-dependent RNA polymerase subunit epsilon	-
DQM75_RS01610 (NCTC11824_00321)	tsaB	308086..308784 (+)	699	WP_043029338.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
DQM75_RS01615 (NCTC11824_00322)	rimI	308787..309212 (+)	426	WP_111692167.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38525.44 Da
• Isoelectric Point: 6.6666

>NTDB_id=1139321 DQM75_RS01590 WP_012678544.1 303274..304320(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=1139321 DQM75_RS01590 WP_012678544.1 303274..304320(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTATGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCGATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAGGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCTACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537