Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   Q426_RS10705 Genome accession   NZ_CP006770
Coordinates   1820808..1820906 (-) Length   32 a.a.
NCBI ID   WP_200831644.1    Uniprot ID   A0A380KSQ5
Organism   Streptococcus equi subsp. zooepidemicus CY     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1815808..1825906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q426_RS08515 (Q426_09120) - 1816882..1818663 (-) 1782 WP_014622105.1 acyltransferase family protein -
  Q426_RS08520 (Q426_09125) - 1818660..1819061 (-) 402 WP_012514718.1 MORN repeat-containing protein -
  Q426_RS08525 (Q426_09130) - 1819067..1819525 (-) 459 WP_012514717.1 low molecular weight protein-tyrosine-phosphatase -
  Q426_RS08530 (Q426_09135) ruvB 1819773..1820774 (-) 1002 WP_014622103.1 Holliday junction branch migration DNA helicase RuvB -
  Q426_RS10705 (Q426_09140) comS 1820808..1820906 (-) 99 WP_200831644.1 quorum-sensing system DWW-type pheromone Regulator
  Q426_RS08535 (Q426_09145) comR 1820989..1821903 (-) 915 WP_014622102.1 helix-turn-helix domain-containing protein Regulator
  Q426_RS08540 (Q426_09150) purB 1822202..1823494 (-) 1293 WP_038674659.1 adenylosuccinate lyase -
  Q426_RS08545 (Q426_09160) - 1824087..1824311 (-) 225 WP_014622100.1 hypothetical protein -
  Q426_RS08550 (Q426_09165) purK 1824326..1825399 (-) 1074 WP_014622099.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  Q426_RS08555 (Q426_09170) purE 1825386..1825874 (-) 489 WP_014622098.1 5-(carboxyamino)imidazole ribonucleotide mutase -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3869.63 Da        Isoelectric Point: 8.5430

>NTDB_id=113931 Q426_RS10705 WP_200831644.1 1820808..1820906(-) (comS) [Streptococcus equi subsp. zooepidemicus CY]
MFKKYQYYLLLAALLLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=113931 Q426_RS10705 WP_200831644.1 1820808..1820906(-) (comS) [Streptococcus equi subsp. zooepidemicus CY]
ATGTTTAAAAAATATCAATACTATCTGCTTTTAGCTGCTTTACTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KSQ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

56.667

93.75

0.531
  comS Streptococcus pyogenes MGAS315

40.625

100

0.406

Multiple sequence alignment