Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM54_RS09195 Genome accession   NZ_LS483375
Coordinates   1868432..1869688 (-) Length   418 a.a.
NCBI ID   WP_302053685.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC3165     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1863432..1874688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM54_RS09175 (NCTC3165_01826) - 1864805..1865350 (+) 546 WP_111724150.1 DUF1307 domain-containing protein -
  DQM54_RS09180 (NCTC3165_01827) - 1865463..1865930 (+) 468 WP_061594120.1 hypothetical protein -
  DQM54_RS09185 (NCTC3165_01828) - 1866035..1866415 (-) 381 WP_045773451.1 PH domain-containing protein -
  DQM54_RS09190 (NCTC3165_01829) - 1866506..1868356 (-) 1851 WP_045504418.1 proline--tRNA ligase -
  DQM54_RS09195 (NCTC3165_01830) eeP 1868432..1869688 (-) 1257 WP_302053685.1 RIP metalloprotease RseP Regulator
  DQM54_RS09200 (NCTC3165_01831) - 1869845..1870648 (-) 804 WP_012130880.1 phosphatidate cytidylyltransferase -
  DQM54_RS09205 (NCTC3165_01832) - 1870657..1871406 (-) 750 WP_008809837.1 isoprenyl transferase -
  DQM54_RS09210 (NCTC3165_01833) yajC 1871665..1871997 (-) 333 WP_012130881.1 preprotein translocase subunit YajC -
  DQM54_RS09215 (NCTC3165_01834) - 1872170..1874284 (-) 2115 WP_111724151.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45685.21 Da        Isoelectric Point: 6.7712

>NTDB_id=1139142 DQM54_RS09195 WP_302053685.1 1868432..1869688(-) (eeP) [Streptococcus gordonii strain NCTC3165]
MMGLLTFIIVFGIIVVVHEYGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWSEDTTEIKT
GTPVSLTLNEEGKVIRVNLSGKKIDQTALPMNVTSFDFEDKLEITGLVLEESRTYSVDHDATIVEADGTEVRIAPLDVQY
QNATIWGRLITNFAGPMNNFILGIVAFWVLIALQGGVQNLDTNHVQVAPNGALAQAGVKNNDQILKVGQTEISNWDDLTQ
AVEKETKGQKNPKLNLTVKSGNETKEVTVSPKKEGDRYLLGVTPGMKSDLMSMMVGGLTMAWDAAFRILNALKNLIFHPS
LNQLGGPVAIFRVSSQAAQAGLDQVISLLALLSINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKRETETYVTLAGVAI
MVVLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=1139142 DQM54_RS09195 WP_302053685.1 1868432..1869688(-) (eeP) [Streptococcus gordonii strain NCTC3165]
ATTATGGGACTCCTCACCTTCATCATTGTTTTTGGTATTATTGTAGTGGTCCATGAGTATGGGCATTTCTACTTTGCCAA
AAAGTCAGGCATTCTCGTTCGAGAATTTGCCATTGGAATGGGACCGAAAATCTTTTCTCATATTGGAAAAGATGGAACAG
CCTATACCATTCGGATTCTTCCTCTAGGTGGCTATGTTCGCATGGCTGGCTGGAGTGAGGATACAACCGAAATCAAAACT
GGAACACCTGTCAGTCTGACTCTAAATGAAGAAGGCAAGGTTATTCGAGTAAATCTATCTGGCAAGAAGATTGACCAGAC
AGCCCTGCCAATGAATGTGACAAGTTTTGATTTTGAAGATAAATTAGAAATCACTGGTTTGGTTCTTGAAGAAAGTAGAA
CCTACTCAGTTGATCACGATGCAACTATTGTTGAAGCAGATGGGACAGAAGTTCGGATTGCGCCTTTGGATGTTCAGTAC
CAAAATGCAACAATCTGGGGACGTTTAATCACAAACTTTGCTGGCCCTATGAATAACTTTATTTTGGGAATCGTGGCTTT
TTGGGTTCTAATTGCTCTCCAAGGTGGTGTTCAAAATTTGGACACAAATCATGTACAGGTTGCTCCGAACGGTGCCTTAG
CTCAAGCTGGTGTAAAAAATAACGATCAGATTCTAAAGGTTGGTCAGACAGAAATTTCAAACTGGGATGATTTGACTCAG
GCAGTTGAAAAGGAAACGAAAGGTCAAAAGAATCCCAAACTTAACCTGACAGTTAAAAGCGGAAACGAGACCAAAGAAGT
GACAGTCAGTCCTAAAAAAGAAGGGGACCGTTACTTATTAGGTGTTACGCCAGGTATGAAGTCGGATCTGATGTCCATGA
TGGTAGGTGGTCTGACCATGGCTTGGGATGCGGCCTTCCGTATTTTAAATGCTTTGAAAAACTTGATTTTCCATCCTAGT
CTTAATCAACTAGGAGGACCGGTTGCTATCTTCCGTGTCAGCAGTCAAGCTGCACAAGCAGGTCTGGATCAGGTGATTAG
TCTATTGGCTCTGTTATCAATCAATATTGGTATTTTCAATTTGATTCCGATCCCAGCTCTTGATGGTGGAAAGATTGTTC
TCAATATTATTGAAGCAATTCGCAGAAAACCGCTCAAGCGCGAAACAGAGACTTATGTAACCTTAGCAGGTGTAGCGATT
ATGGTTGTGCTGATGATTGCTGTTACCTGGAATGATATTATGCGTACATTCTTTTAA

Domains


Predicted by InterproScan.

(205-269)

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.286

100

0.646

  eeP Streptococcus thermophilus LMD-9

64.048

100

0.644


Multiple sequence alignment