Detailed information NTG0113912

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: Q426_RS07350
• Genome accession: NZ_CP006770
• Coordinates: 1578985..1580031 (-)
• Length: 348 a.a.
• NCBI ID: WP_014622278.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus CY
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1573985..1585031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q426_RS07325 (Q426_07800)	rimI	1574094..1574519 (-)	426	WP_014622281.1	ribosomal protein S18-alanine N-acetyltransferase	-
Q426_RS07330 (Q426_07805)	tsaB	1574522..1575220 (-)	699	WP_014622280.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
Q426_RS07335 (Q426_07810)	-	1575506..1575736 (+)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
Q426_RS07340 (Q426_07815)	rnjA	1575738..1577420 (+)	1683	WP_012514941.1	ribonuclease J1	-
Q426_RS07345 (Q426_07820)	amiF	1578050..1578985 (-)	936	WP_012514940.1	ABC transporter ATP-binding protein	Regulator
Q426_RS07350 (Q426_07825)	oppD	1578985..1580031 (-)	1047	WP_014622278.1	ABC transporter ATP-binding protein	Regulator
Q426_RS07355 (Q426_07830)	-	1580043..1581074 (-)	1032	WP_014622277.1	ABC transporter permease	-
Q426_RS07360 (Q426_07835)	-	1581084..1581998 (-)	915	WP_012514937.1	ABC transporter permease	-
Q426_RS07365 (Q426_07840)	-	1582165..1583823 (-)	1659	WP_012678547.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38542.47 Da
• Isoelectric Point: 6.8385

>NTDB_id=113912 Q426_RS07350 WP_014622278.1 1578985..1580031(-) (oppD) [Streptococcus equi subsp. zooepidemicus CY]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=113912 Q426_RS07350 WP_014622278.1 1578985..1580031(-) (oppD) [Streptococcus equi subsp. zooepidemicus CY]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGTTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGAAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAAGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTTCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGTGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAAGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537