Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | DQM57_RS04720 | Genome accession | NZ_LS483369 |
| Coordinates | 897311..898237 (-) | Length | 308 a.a. |
| NCBI ID | WP_108043583.1 | Uniprot ID | - |
| Organism | Neisseria cinerea strain NCTC10294 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 892311..903237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM57_RS04685 (NCTC10294_00896) | yaaA | 892389..893168 (-) | 780 | WP_108043589.1 | peroxide stress protein YaaA | - |
| DQM57_RS04690 (NCTC10294_00897) | dapC | 893324..894511 (-) | 1188 | WP_108043588.1 | succinyldiaminopimelate transaminase | - |
| DQM57_RS04695 (NCTC10294_00898) | dut | 894589..895041 (-) | 453 | WP_003674996.1 | dUTP diphosphatase | - |
| DQM57_RS04700 (NCTC10294_00899) | - | 895187..895897 (+) | 711 | WP_108043587.1 | AzlC family ABC transporter permease | - |
| DQM57_RS04705 (NCTC10294_00900) | - | 895894..896202 (+) | 309 | WP_108043586.1 | AzlD family protein | - |
| DQM57_RS04710 (NCTC10294_00901) | pilX | 896269..896748 (-) | 480 | WP_197711733.1 | PilX family type IV pilin | Machinery gene |
| DQM57_RS04715 (NCTC10294_00902) | pilK | 896757..897332 (-) | 576 | WP_111727130.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| DQM57_RS04720 (NCTC10294_00903) | pilJ | 897311..898237 (-) | 927 | WP_108043583.1 | PilW family protein | Machinery gene |
| DQM57_RS04725 (NCTC10294_00904) | pilV | 898234..898842 (-) | 609 | WP_167395535.1 | type IV pilus modification protein PilV | Machinery gene |
| DQM57_RS04730 (NCTC10294_00905) | pilH | 898866..899534 (-) | 669 | WP_108043581.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| DQM57_RS04735 (NCTC10294_00906) | dnaB | 899691..901097 (-) | 1407 | WP_111727132.1 | replicative DNA helicase | - |
| DQM57_RS04745 (NCTC10294_00907) | - | 901261..901842 (+) | 582 | WP_003777725.1 | superoxide dismutase | - |
| DQM57_RS04750 (NCTC10294_00908) | - | 901955..902290 (-) | 336 | WP_111727134.1 | general secretion pathway protein GspG | - |
Sequence
Protein
Download Length: 308 a.a. Molecular weight: 33505.37 Da Isoelectric Point: 9.0395
>NTDB_id=1138952 DQM57_RS04720 WP_108043583.1 897311..898237(-) (pilJ) [Neisseria cinerea strain NCTC10294]
MKRKILVIPNGCDSGMKGFTIVEFLVAALLSMIVLMAVGSSYFTSRRLNNAASERLSAQQDLRNAATLIVRDARMAGNFG
CFNMAVNPSSAVISDKTEKNPFFALKKGNLDKLIPVAESTDIKYPGFSQSGKALIFQYGIDDLDASAETVVVSSCSAIAK
PGKKISTLGEAKSELKITDNTQNGNITRQKHEVNAYAVGKISNEEGLFRFQLKDNGQWGNPQLLVKKINKMDIRYIYVSD
CSLVEGDGKVEKFKYTDTFDISQAAVTPAEVEILLNSGKLAASADNEVYAYRINATIRGGNVCANRTL
MKRKILVIPNGCDSGMKGFTIVEFLVAALLSMIVLMAVGSSYFTSRRLNNAASERLSAQQDLRNAATLIVRDARMAGNFG
CFNMAVNPSSAVISDKTEKNPFFALKKGNLDKLIPVAESTDIKYPGFSQSGKALIFQYGIDDLDASAETVVVSSCSAIAK
PGKKISTLGEAKSELKITDNTQNGNITRQKHEVNAYAVGKISNEEGLFRFQLKDNGQWGNPQLLVKKINKMDIRYIYVSD
CSLVEGDGKVEKFKYTDTFDISQAAVTPAEVEILLNSGKLAASADNEVYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 927 bp
>NTDB_id=1138952 DQM57_RS04720 WP_108043583.1 897311..898237(-) (pilJ) [Neisseria cinerea strain NCTC10294]
ATGAAACGTAAAATACTAGTCATACCAAATGGTTGTGATAGTGGCATGAAAGGTTTTACCATTGTTGAATTTCTGGTCGC
AGCCCTGCTCAGTATGATTGTTTTGATGGCAGTCGGTTCAAGTTACTTCACATCCCGAAGATTAAATAATGCGGCAAGCG
AGCGTCTTTCTGCTCAGCAGGATTTGCGTAATGCGGCAACATTGATTGTTCGCGATGCAAGAATGGCGGGTAATTTCGGC
TGTTTTAATATGGCTGTAAATCCTTCAAGTGCCGTTATTTCCGATAAAACTGAGAAAAATCCCTTCTTTGCCTTGAAAAA
GGGTAATTTGGATAAACTGATTCCCGTTGCCGAATCCACGGATATTAAATATCCGGGCTTTAGTCAGTCTGGAAAGGCAT
TGATTTTCCAGTACGGTATTGATGATCTTGATGCGAGTGCCGAGACTGTTGTGGTTAGCAGTTGTTCTGCAATAGCAAAA
CCGGGTAAGAAAATATCTACCTTGGGGGAAGCAAAGAGTGAATTAAAGATTACGGACAATACACAAAATGGAAATATCAC
CCGTCAAAAACATGAGGTTAATGCCTATGCGGTCGGCAAGATTTCTAATGAGGAAGGTTTGTTCCGTTTTCAATTGAAGG
ATAATGGGCAGTGGGGTAATCCTCAGTTGTTGGTTAAAAAGATTAATAAAATGGATATACGGTATATTTATGTTTCCGAT
TGTTCTCTGGTAGAGGGTGATGGAAAAGTAGAGAAGTTCAAATATACGGATACATTTGATATTTCGCAGGCGGCAGTTAC
ACCTGCTGAGGTTGAGATTTTGTTGAATAGCGGTAAGCTTGCTGCCTCTGCCGACAATGAAGTTTATGCTTACCGTATCA
ATGCGACAATACGCGGGGGGAATGTATGCGCAAACAGAACGCTTTAA
ATGAAACGTAAAATACTAGTCATACCAAATGGTTGTGATAGTGGCATGAAAGGTTTTACCATTGTTGAATTTCTGGTCGC
AGCCCTGCTCAGTATGATTGTTTTGATGGCAGTCGGTTCAAGTTACTTCACATCCCGAAGATTAAATAATGCGGCAAGCG
AGCGTCTTTCTGCTCAGCAGGATTTGCGTAATGCGGCAACATTGATTGTTCGCGATGCAAGAATGGCGGGTAATTTCGGC
TGTTTTAATATGGCTGTAAATCCTTCAAGTGCCGTTATTTCCGATAAAACTGAGAAAAATCCCTTCTTTGCCTTGAAAAA
GGGTAATTTGGATAAACTGATTCCCGTTGCCGAATCCACGGATATTAAATATCCGGGCTTTAGTCAGTCTGGAAAGGCAT
TGATTTTCCAGTACGGTATTGATGATCTTGATGCGAGTGCCGAGACTGTTGTGGTTAGCAGTTGTTCTGCAATAGCAAAA
CCGGGTAAGAAAATATCTACCTTGGGGGAAGCAAAGAGTGAATTAAAGATTACGGACAATACACAAAATGGAAATATCAC
CCGTCAAAAACATGAGGTTAATGCCTATGCGGTCGGCAAGATTTCTAATGAGGAAGGTTTGTTCCGTTTTCAATTGAAGG
ATAATGGGCAGTGGGGTAATCCTCAGTTGTTGGTTAAAAAGATTAATAAAATGGATATACGGTATATTTATGTTTCCGAT
TGTTCTCTGGTAGAGGGTGATGGAAAAGTAGAGAAGTTCAAATATACGGATACATTTGATATTTCGCAGGCGGCAGTTAC
ACCTGCTGAGGTTGAGATTTTGTTGAATAGCGGTAAGCTTGCTGCCTCTGCCGACAATGAAGTTTATGCTTACCGTATCA
ATGCGACAATACGCGGGGGGAATGTATGCGCAAACAGAACGCTTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
66.772 |
100 |
0.685 |