Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   DQM57_RS01735 Genome accession   NZ_LS483369
Coordinates   326153..327184 (-) Length   343 a.a.
NCBI ID   WP_111726504.1    Uniprot ID   A0A7T3ES87
Organism   Neisseria cinerea strain NCTC10294     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 321153..332184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM57_RS01715 (NCTC10294_00328) - 322635..323261 (-) 627 WP_111726501.1 phosphoribosylanthranilate isomerase -
  DQM57_RS01720 (NCTC10294_00329) greB 323320..323811 (-) 492 WP_003675566.1 transcription elongation factor GreB -
  DQM57_RS01725 (NCTC10294_00330) purF 323911..325455 (-) 1545 WP_111726503.1 amidophosphoribosyltransferase -
  DQM57_RS01730 (NCTC10294_00331) - 325663..326160 (-) 498 WP_108043262.1 CvpA family protein -
  DQM57_RS01735 (NCTC10294_00332) tpc 326153..327184 (-) 1032 WP_111726504.1 cell division protein FtsN Machinery gene
  DQM57_RS01740 (NCTC10294_00333) folC 327197..328471 (-) 1275 WP_107960045.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  DQM57_RS01745 (NCTC10294_00334) - 328501..328947 (-) 447 WP_107996861.1 protein YgfX -
  DQM57_RS01750 (NCTC10294_00335) - 328952..329311 (-) 360 WP_107996862.1 hypothetical protein -
  DQM57_RS01755 (NCTC10294_00336) - 329380..330108 (-) 729 WP_002240396.1 amino acid ABC transporter ATP-binding protein -
  DQM57_RS01760 (NCTC10294_00338) rsmA 330281..331066 (-) 786 WP_111726506.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 36829.93 Da        Isoelectric Point: 8.8213

>NTDB_id=1138938 DQM57_RS01735 WP_111726504.1 326153..327184(-) (tpc) [Neisseria cinerea strain NCTC10294]
MSENKQNEVLTGYEQLKRRNRRRLVTASCLVAASCLLLAAALSSDPAENPPAAPTDETGSVENQAASTVQTPTLKSASEG
VEPAADKPQDLAGEEQAPAADNGISEPEDVGAPLVIINDRLDDSNIKGLEASEKLQQEEAAQTAQAEAKQRAAEKAQATV
DNKDTAEKPKQAAESKPQKTERAAESKPKTKEPAQKTADKVSEKPKTLPEKSKSDSTKSDKAVKEPKKSDKAESKKPVEK
EGSDGKKHETASKADKAKTAEKEKSEKSGKKSAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKN
ARDAERDLNKLRVHGIAGQVTNE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=1138938 DQM57_RS01735 WP_111726504.1 326153..327184(-) (tpc) [Neisseria cinerea strain NCTC10294]
ATGTCCGAAAACAAACAAAACGAAGTCCTGACCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGCTGCCTGGTTGCCGCCTCCTGCCTGCTGCTGGCGGCCGCCCTCAGTTCCGATCCTGCCGAAAATCCCCCTGCCGCAC
CGACTGACGAAACAGGCAGCGTGGAAAACCAAGCGGCAAGCACGGTACAAACCCCGACCTTAAAATCCGCCTCAGAAGGT
GTTGAACCTGCCGCCGACAAACCTCAAGACCTGGCCGGTGAAGAACAAGCACCTGCCGCCGACAACGGAATCAGCGAACC
TGAAGACGTAGGCGCACCATTGGTCATCATCAACGACCGACTCGACGACAGCAATATCAAAGGCTTGGAAGCATCCGAAA
AACTACAACAGGAAGAAGCTGCCCAAACCGCACAGGCAGAGGCAAAACAACGCGCAGCCGAAAAAGCGCAGGCAACGGTT
GACAACAAAGATACGGCTGAAAAACCGAAACAGGCAGCCGAATCCAAACCGCAAAAAACGGAACGCGCAGCCGAATCCAA
ACCCAAAACCAAAGAGCCGGCACAAAAAACCGCCGACAAAGTCTCCGAGAAGCCCAAAACCTTACCCGAAAAAAGCAAAT
CAGACTCAACCAAATCAGACAAAGCAGTAAAAGAACCGAAAAAATCCGATAAGGCCGAAAGTAAAAAACCGGTTGAAAAA
GAGGGTTCGGACGGTAAAAAACACGAAACGGCATCCAAGGCAGACAAAGCCAAAACTGCCGAAAAAGAAAAATCCGAAAA
ATCCGGTAAAAAATCCGCCATCCAGGCAGGTTATGCCGAAAAAGAACGCGCCTTGAGCCTCCAGCGCAAAATGAAGGCAG
CCGGCATCGACTCGACCATTACTGAAATTATGACCGATAACGGCAAAGTTTACCGTGTCAAATCAAGCAACTATAAAAAC
GCGAGAGATGCCGAACGCGATTTGAACAAATTACGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains


Predicted by InterproScan.

(273-341)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7T3ES87

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

77.011

100

0.781


Multiple sequence alignment