Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM56_RS09105 Genome accession   NZ_LS483368
Coordinates   1890082..1891347 (-) Length   421 a.a.
NCBI ID   WP_111710846.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC6176     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1885082..1896347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM56_RS09095 (NCTC6176_01842) - 1887347..1887904 (-) 558 WP_015898573.1 nucleotidyltransferase family protein -
  DQM56_RS09100 (NCTC6176_01843) - 1887956..1889812 (-) 1857 WP_111710845.1 proline--tRNA ligase -
  DQM56_RS09105 (NCTC6176_01844) eeP 1890082..1891347 (-) 1266 WP_111710846.1 RIP metalloprotease RseP Regulator
  DQM56_RS09110 (NCTC6176_01845) - 1891379..1892173 (-) 795 WP_012677326.1 phosphatidate cytidylyltransferase -
  DQM56_RS09115 (NCTC6176_01846) - 1892183..1892932 (-) 750 WP_111710847.1 isoprenyl transferase -
  DQM56_RS09120 (NCTC6176_01847) yajC 1893106..1893465 (-) 360 WP_111710848.1 preprotein translocase subunit YajC -
  DQM56_RS09125 (NCTC6176_01848) traF 1893579..1893941 (-) 363 WP_052495516.1 conjugal transfer protein TraF -
  DQM56_RS09130 (NCTC6176_01849) dexB 1894050..1895669 (-) 1620 WP_111710849.1 glucan 1,6-alpha-glucosidase DexB -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45956.43 Da        Isoelectric Point: 5.9240

>NTDB_id=1138924 DQM56_RS09105 WP_111710846.1 1890082..1891347(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC6176]
MLGIITFIIIFGILVLVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQGKLDPTSLPMNVTAYDLEDKLTITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=1138924 DQM56_RS09105 WP_111710846.1 1890082..1891347(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC6176]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGCTTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACAACTGAGATAAAAACA
GGAACGCCTGCTAGCTTGACGCTCAATGACCAAGGTCTGGTCAAGCGGATTAATCTATCTCAGGGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGACCAAGA
CCTATTCGGTAGATCATGATGCTACCATTGTCGAGGAGGATGGTACAGAGATCCGGATTGCACCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

99.762

0.682

  eeP Streptococcus thermophilus LMD-9

68.095

99.762

0.679


Multiple sequence alignment