Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM52_RS01280 Genome accession   NZ_LS483367
Coordinates   229947..231206 (+) Length   419 a.a.
NCBI ID   WP_046159578.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 224947..236206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM52_RS01255 (NCTC5371_00258) - 226803..227093 (-) 291 WP_003057858.1 hypothetical protein -
  DQM52_RS01260 (NCTC5371_00259) - 227249..227599 (+) 351 WP_003057937.1 thioredoxin domain-containing protein -
  DQM52_RS01265 (NCTC5371_00260) yajC 227706..228065 (+) 360 WP_003061950.1 preprotein translocase subunit YajC -
  DQM52_RS01270 (NCTC5371_00261) - 228293..229042 (+) 750 WP_003057878.1 isoprenyl transferase -
  DQM52_RS01275 (NCTC5371_00262) - 229055..229849 (+) 795 WP_046159577.1 phosphatidate cytidylyltransferase -
  DQM52_RS01280 (NCTC5371_00263) eeP 229947..231206 (+) 1260 WP_046159578.1 RIP metalloprotease RseP Regulator
  DQM52_RS01285 (NCTC5371_00264) - 231397..233253 (+) 1857 WP_111681505.1 proline--tRNA ligase -
  DQM52_RS01290 (NCTC5371_00265) - 233306..233863 (+) 558 WP_012766519.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45664.28 Da        Isoelectric Point: 8.2837

>NTDB_id=1138821 DQM52_RS01280 WP_046159578.1 229947..231206(+) (eeP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQEGTLYTLRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGLVKRINLSQSKIDPTSLPMNVTSYDLEDDLSITGLVLDETKTYAVDHNATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNQVRVQENGAAAKAGIRDNDRIVTINGHKVKDWADLTE
AVQASTRNLGASETIKVTYKSGQTLKTVAVKPQKQGNQYALGVKARLKTGFVDKLLGGLELAWNGAFAILNTLKGLITAF
SLNKLGGPVAMYQMSNQAAQNGLDSVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEVIRRKPLKQETETYITLVGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1138821 DQM52_RS01280 WP_046159578.1 229947..231206(+) (eeP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGGATTTTAGTCATTGTCCATGAATTTGGGCATTTCTATTTTGCCAA
AAAATCTGGGATTCTTGTCAGAGAATTTGCCATTGGTATGGGCCCCAAAATCTTTTCGCATGTTGACCAAGAAGGAACTC
TCTACACCTTGAGAATTTTGCCTTTGGGTGGTTACGTGCGTATGGCTGGTTGGGGAGATGACAAGACAGAAATCAAGACT
GGGACACCAGCTAGCTTGACGCTAAATGAGCAAGGGTTGGTCAAGCGCATCAACTTGTCTCAAAGTAAGATTGATCCCAC
TAGCCTGCCCATGAATGTCACCTCCTATGATTTGGAAGATGACCTTAGTATCACCGGTTTGGTTTTGGATGAGACCAAGA
CTTATGCTGTTGACCATAATGCAACCATTGTTGAAGAAGACGGTACTGAGATTCGAATCGCTCCGCTTGATGTGCAATAC
CAAAATGCTAGCATTGGTGGTCGCTTAATCACTAACTTTGCTGGCCCTATGAATAACTTTATTCTAGGGATTGTGGTTTT
TATCCTCCTTGTTTTTTTACAAGGTGGTATGCCAGATTTTAGTAGCAATCAGGTCCGTGTGCAAGAAAATGGTGCCGCTG
CTAAAGCTGGTATCCGCGACAATGACCGGATTGTCACTATCAATGGTCATAAGGTCAAGGATTGGGCAGATTTGACCGAA
GCGGTCCAAGCGTCTACTCGCAATCTAGGTGCTTCCGAAACGATTAAGGTGACTTACAAATCAGGTCAAACCCTAAAAAC
CGTCGCTGTTAAGCCTCAAAAACAGGGCAATCAATATGCTCTAGGTGTGAAGGCAAGGTTGAAAACAGGTTTTGTTGATA
AGCTTCTAGGCGGTTTAGAATTGGCTTGGAATGGTGCTTTTGCTATTTTGAACACCTTGAAAGGTCTGATCACTGCCTTT
AGTTTAAATAAGCTAGGTGGTCCAGTTGCCATGTACCAAATGTCTAATCAGGCTGCCCAAAATGGCTTAGATTCTGTCTT
ATCTCTCATGGCAATGCTCTCTATCAACTTGGGAATTTTCAACTTAATTCCAATCCCTGCCCTTGACGGTGGGAAAATCT
TGATGAATATTATTGAAGTCATTCGTCGTAAACCTTTGAAACAAGAAACAGAAACCTATATCACTCTTGTTGGGGTTGCC
ATCATGGTTGTACTGATGATTGCCGTGACGTGGAATGATATTATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(206-271)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.359

100

0.697

  eeP Streptococcus thermophilus LMD-9

69.121

100

0.695


Multiple sequence alignment