Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQM91_RS11515 | Genome accession | NZ_LS483365 |
| Coordinates | 2172330..2172725 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus NCTC 8325 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2167330..2177725
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM91_RS11490 (NCTC8325_02125) | thiE | 2167930..2168571 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| DQM91_RS11495 (NCTC8325_02126) | thiM | 2168573..2169364 (-) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| DQM91_RS11500 (NCTC8325_02127) | thiD | 2169348..2170178 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQM91_RS11505 (NCTC8325_02128) | tenA | 2170171..2170860 (-) | 690 | WP_000396076.1 | thiaminase II | - |
| DQM91_RS11510 (NCTC8325_02130) | sceD | 2171246..2171941 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| DQM91_RS11515 (NCTC8325_02131) | ssb | 2172330..2172725 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| DQM91_RS11520 (NCTC8325_02132) | - | 2172919..2173359 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| DQM91_RS11525 (NCTC8325_02133) | fabZ | 2173418..2173858 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DQM91_RS11530 (NCTC8325_02134) | murA | 2173892..2175157 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQM91_RS11535 (NCTC8325_02135) | - | 2175268..2175501 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| DQM91_RS11540 | - | 2175633..2175725 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| DQM91_RS11545 (NCTC8325_02136) | - | 2176063..2176467 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1138741 DQM91_RS11515 WP_000932694.1 2172330..2172725(-) (ssb) [Staphylococcus aureus subsp. aureus NCTC 8325]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1138741 DQM91_RS11515 WP_000932694.1 2172330..2172725(-) (ssb) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |